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ET13628

CSHL Arabidopsis genetrap mutant lines

Original: ET13628

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13628

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10887891 [Map]; Strand: w
      • AT4G20140.1 - [+] show detail - Leucine-rich repeat transmembrane protein kinase
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13628 - 3-prime edge
    TTCATCCTAC TTTCTCCGCA CCTGACAAGC TGCGTCTTCC TCAAATGGCA 
    AAAGTGGCTT AAGCTTTGGA TCTATGAGTT CATCTCTCTC AAAAACCGCT
    ACTTCAAGAT GTGTTTCAAC CCATCTCACC ATGTCCATCT CTGCACCAAA
    CACTGAGTCG GTTGGCATTT TCCCAGTCAC AATCTCCATC AACACGATCC
    CCATACTGTA AACGTCGTTC ATCTCACTCG A

AT4G20140.1

Model type
Protein coding
Short Description
Leucine-rich repeat transmembrane protein kinase
Curator Summary
Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.
Computational Description
GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink).
Link
InterPro Scan - TAIR