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Mutant Lines
ET13633

ET13633

CSHL Arabidopsis genetrap mutant lines

Original: ET13633

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13633

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 4014217 [Map]; Strand: w
- AT3G12640.1 - [+] show detail - RNA binding (RRM/RBD/RNP motifs) family protein
  Distance: 0; Region: exon1 (5UTR)

TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAATTGAAAT 
CCTGATTAAT GTCTAAGGGA CGGAACAAAT TAGATATGAA AAGCCTCTCT 
GAATTTCTTT TAATTATAAA CGGTGCGTTT TGTGTTTCAA TTTAAAACAA 
CACATTTATA TTTTCACTAT TGGGTTGGGC CTAATTAGGT GCTCCAACTT 
TTAGTTTTTT TTTTCCGCCA GTTTTTTTTT TCGGCCAAAA GTTTAAAAAA 
ACCTAATTGC CTGAAAAGAC CGGATTTTTT TGCAATTTTT AAAAGACAAT 
TGAAAATTTG CCCCATGAAA TTACTTTTTT ACCCCTTTTT TTAAGGAAAA 
TTAACCTTAA CCTGGCTACC AAGAAAATTG CCTTAAAAAA ACAAATTTTT 
GTGGAATTTT AAAAAAATTT CAAAAAATTT TTTGATGGCT TGAAAAAAAT 
TCCCCTAAAA AACCCCTAAA AAGGATAAAC CCCTTGTTAT TTTTTTTAAA 
AAAAACCAAA GGCCAAGGGA AAAGTTAAAA AGGTAAGCTT TAAAAAAAAC 
CAATTTTTTA AAATAATGGG ACCCCAAAAA ATTGTTACCC CTTAAAA

AT3G12640.1

Model type: Protein coding
Short Description: RNA binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G24350.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink).
Link: InterPro Scan - TAIR