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ET13644

CSHL Arabidopsis genetrap mutant lines

Original: ET13644

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13644

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19875954 [Map]; Strand: c
      • AT3G53600.1 - [+] show detail - C2H2-type zinc finger family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13644 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGT 
    AGCAGCAAGG AGATCTTGGA CTTAAATCTA ACTCCATTGG AAAATGATCT 
    TGTGTTAATC TTTGGGAAGA ATTTGGTTCC ACAAATTGAT TTGAAGTTTG 
    TGAATTAGTA GGGTTTTAAA CCTTTCTCTG TACTTTTGTT GTTGTTTTTT 
    TCTCTCTTGC TACACATTAT TTCATTCTTT CCGTCATGTA TGCATACACA 
    ATTTGTTTGA ATAAAAGGTT TCAATTCTTG CAATGAGTGA TAAAACATTA 
    ATAGTTGAAA GTTTGAAACA GAACCATTCT CGAATGTATA CATAGAATCC 
    AATATCATTG GTGTGTGAGT GAGATAAACT GATATTATCA TAAGTCATAA 
    TCTGATGTCA GAGAATCCAT TCCAGAAATA TGGAATACGA ATTGTGTCCT 
    TCACAGTCAC ACTATACCAT TAGGGAAAGA GAGAATCTTA AAAGAATACG 
    TAGAAACACC ATCTCACATA GAAGAAAAGC AAAAGAAGAT TGATTTCCTT 
    TTTCATTTTT TCTTTCCAAA TACCATTTCT CTTTCA

AT3G53600.1

Model type
Protein coding
Short Description
C2H2-type zinc finger family protein
Computational Description
C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT2G37430.1); Has 959 Blast hits to 927 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 2; Plants - 801; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR