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ET13650

CSHL Arabidopsis genetrap mutant lines

Original: ET13650

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13650

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 15267703 [Map]; Strand: w
      • AT3G43310.1 - [+] show detail - pseudogene, hypothetical protein, hypothetical protein At2g15420 - Arabidopsi...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET13650 - 3-prime edge
    AATGCAGTTG GCTTGATGAT GTTGGGAGCC CACTGTGGAG TTGAGGTTGA 
    TGCCGACCTT TTGGAAGAGG CTACCACCTT TGTTGCCCCA AAAGATAATC
    CGG
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3452941 [Map]; Strand: c
      • AT3G11010.1 - [+] show detail - receptor like protein 34
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13650 - 5-prime edge
    CCTACTTTCT CCCTGAAACA GCTGACCCGC TTAGATGTTT TTTCCAACAA 
    GCTCGGTGGA AACTTTCCCA ATGTCCTACT AAACTTGACA GGGTTGTCAG
    TTGTATCACT CTCCAACAAT AAGTTCACAG GCACGCTTCC TCCTAATATC
    ACTTCACTAT CCAACTTGAT GGCTTTTTAT GCAAGTGACA ACGCCTTCAC
    CGGAACATTC CCTTCATCTC ACTCGA

AT3G11010.1

Model type
Protein coding
Short Description
receptor like protein 34
Computational Description
receptor like protein 34 (RLP34); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 53 (TAIR:AT5G27060.1); Has 142392 Blast hits to 33789 proteins in 1239 species: Archae - 73; Bacteria - 11207; Metazoa - 34063; Fungi - 1634; Plants - 83633; Viruses - 34; Other Eukaryotes - 11748 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G43310.1

Model type
Pseudogene
Computational Description
pseudogene, hypothetical protein, hypothetical protein At2g15420 - Arabidopsis thaliana, EMBL:AC006920
Link
InterPro Scan - TAIR