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ET13653

CSHL Arabidopsis genetrap mutant lines

Original: ET13653

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13653

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22868572 [Map]; Strand: w
      • AT1G61890.1 - [+] show detail - MATE efflux family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: ET13653 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTGATG AAAGTAGGAT GGGAAAATTG 
    ATGAAAGTAG GATGGGCGTT GTGGGGATTC CAGTGGGATT CGTTCTTGGC 
    TTCACTTATG ATATGGGAGC TAAGGTAAAT ATTTCTCATG TAAATATGGT 
    TACAATAATT GTACCTTATT AAATTATAAT AGCTGTAATA TTTAATGTGT 
    GTGTTTGATA TGGTGCAGGG AATATGGACT GGGATGATTG GTGGTACTTT 
    AATGCAAACA ATAATCTTAG TGATTGTCAC TTTACGAACT GATTGGGACA 
    AAGAGGTAAA TTATTTTTAT TTTTTTAATC TAGGAGCATT TTTAGGTTTA 
    TAATGAAAAG TTTTATGCAC AAATCTTTGT ATGATTTTTG GTAGATATGA 
    TAATGATGGG AATGGATTCA ATGAATCGTG GTATTAATCT AAATTAATTT 
    TGTAATTTAG GTTGAGAAAG CTTCGAGCAG ATTGGACCAG TGGGAAGAGA 
    GCCGTGAGCC GCTTTTGAAG CAATAAAATG ATTTGTTTAT TTTTATTTTT 
    TTGGGAGTTT TGAGGTCAGA TTGAAATCAA AATTTTTGTT TCCCCGAAAT 
    AT

AT1G61890.1

Model type
Protein coding
Short Description
MATE efflux family protein
Computational Description
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to karrikin; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G11670.1); Has 9516 Blast hits to 9487 proteins in 1915 species: Archae - 228; Bacteria - 6498; Metazoa - 145; Fungi - 328; Plants - 1371; Viruses - 0; Other Eukaryotes - 946 (source: NCBI BLink).
Link
InterPro Scan - TAIR