1. Home
  2. Mutant Lines
  3. ET13659

ET13659

CSHL Arabidopsis genetrap mutant lines

Original: ET13659

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13659

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8864933 [Map]; Strand: c
      • AT5G25460.1 - [+] show detail - Protein of unknown function, DUF642
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET13659 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAACCCGGC TCGACAACTG 
    GAGTTTTGAT CCCACCGTTT ATAGAAGACG ACCACTCTCC TTTACCTGGA 
    TGGATGGTGG AGTCTCTCAA AGCTGTCAAG TACGTAGACG TTGAACATTT 
    CTCAGTCCCA CAGGGTCGCA GAGCTATTGA GCTTGTAGCG GGTAAAGAGA 
    GTGCCATCGC TCAAGTGGTT CGGACTGTCA TTGGGAAGAC TTACGTGCTG 
    TCTTTTGCGG TTGGAGACGC CAACAATGCT TGCAAAGGAT CAATGGTGGT 
    TGAGGCTTTT GCAGGAAAAG ATACACTTAA GGTCCCTTAC GAGTCGAAAG 
    GCACAGGAGG GTTTAAACGA GCTTCTATTC GATTTGTGGC GGTTTCGACC 
    CGATCAAGAA TTATGTTCTA CAGCACTTTC TATGCCATGA GGAGCGATGA 
    TTT

AT5G25460.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF642
Computational Description
Protein of unknown function, DUF642; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G11420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR