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ET13662

CSHL Arabidopsis genetrap mutant lines

Original: ET13662

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13662

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3394877 [Map]; Strand: c
      • AT3G10845.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: ET13662 - 5-prime edge 
    AAACGGTAGA GGTATTTTAC TCAGTCAATG AAGAGCTTAG CTTAGGCAGT 
    TTAAGATAAA TCTTGCGATC GAGCAAACAT TCTCCATCCT TCTTTTCCAG 
    TGCCTAGAGT GAAAAAAACG TCAGAAAAGA ACCTTGGATA CGTTTAAACA 
    TATAACTAAC TATACACAAG TTTTCAAAGA AAAAAAAAAC TGGCCTCCCT 
    TTTTTTGTTT CATAGGGAGA AGCAAACTCA ACAAAACCAG AGCCGGTACG 
    CCCACCATCT CGTTTTATAG CAAGTCGAAC ATGAACAACT TCTCCAACAT 
    CTTTGAAAAA AGCGACAATA TGTGATAAGG GGGCTCGGGG AGGGATACGG 
    CCCATAAAGA GCGTATTTTT TTATCACGGA AGCTTCCTGA ATTTAACAGC 
    CAAGCAAAAG TTTGGGTTAG CTTGACAAAA AGGACAAAAC AAAATTG

AT3G10845.1

Model type
Protein coding
Short Description
RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description
RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G45100.1); Has 2317 Blast hits to 1788 proteins in 256 species: Archae - 0; Bacteria - 24; Metazoa - 947; Fungi - 528; Plants - 665; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink).
Link
InterPro Scan - TAIR