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ET13667

CSHL Arabidopsis genetrap mutant lines

Original: ET13667

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13667

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5093441 [Map]; Strand: c
      • AT1G14780.1 - [+] show detail - MAC/Perforin domain-containing protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: ET13667 - 3-prime edge
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTC 
    ACCGGAGCAC AACTCGCAGT GAAAAAACAC TGCTCAAAAT CCGATCTCCA
    ACTCCACACT CGCGTATGGC TAAACTCTCT GATCATTACG GCCTTCAGAA
    TAATTGGGTT CATAGGACCA ATTGGGACTT CTCAAAACAT CAGGAATCTT
    CTCTTCCATG AGCGAGCCGA TTGACGTAGA AGGGAGTGTG CCTCATACAT
    ATGATCCAAA AAGACCAAAA CGAGGTCGAT TTGGATTCAG GTGTCTTCCC
    TGGAGGACCT CCTGTGCCGG CTAATAACAA GATAGTGAAA TTCGGCGATC
    TTTCGCAATT ATGTCGAGGA CCTCAACATA GTCCGGGACA TTGGTTAGTC
    ACTGGAGAGA GGCTATACTT GGACAAGGGC AAACTTTGCT TACACGGCAA
    GTTAGCTCTG CTACATCGCC AACGACTTCT GNGGCTCTCG ACTAGATTTC
    GGATCCAATT TTTTGGGTTG ATTTCGATTC GGATAACCGA TTCTGGTTTT
    TTGTCCGGCC TAATTTATTC CTGACAATCG GCCATAGTAG GTAAAAATAA
    TGAAATGATT GAATAAGGTC GAATTAGTAG ATTTAAATCA TCCTTTTGGA
    TAGATTAAAA ATTTACAAAT GTATGATAAA TTATATTTTG ATGAAATATA
    CAATTTGGGA TTACAAAAAA AATTGATATT TACCATGAAA AATATATTGC
    TGTATAACA

AT1G14780.1

Model type
Protein coding
Short Description
MAC/Perforin domain-containing protein
Computational Description
MAC/Perforin domain-containing protein; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 221 Blast hits to 220 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR