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ET13672

CSHL Arabidopsis genetrap mutant lines

Original: ET13672

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13672

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28600250 [Map]; Strand: w
      • AT1G76230.1 - [+] show detail - unknown protein; Has 26 Blast hits to 18 proteins in 3 species: Archae - 0; B...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13672 - 3-prime edge
    TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    CTTGTCCAAT TCTTCCCTCA ACACTAGTCA TAGCAGTAAG AAGACGATAA
    GGGAAGATGC AATTTGTGAA TCAAAGAATA GAAAGAAGTA TAAGCCAAGC
    AACGAATCTG GATTCAACAC GTTATTTGAT GATGACTGGC TTTTTGGTAA
    CAATCAGCAA AAGAATGTTG TTACCACTAA TAAAGCCGCT ATCAAGAACG
    ATGCAGAGAT GATCATGAAG TTGCTGCAGA GATCATGTGG AGATTCCTTG
    TTTCCTAGCT AAGGCCCAGT TTTCGCCTCA ATTCGGAATA TTTGTATTAC
    CATATACAGT TCCGTTCTAA CTGTCTCTGT ATTGTTTTCT CCCCCCCTTC
    GACCAGGATT TTAGCCTTAG CCTGTGATCT ATTCGGGTAT GTATATTTCA
    TATCCTATCA TGAATATCTC TGTTAACTCG TAATCTGTAT AATTTTTTGT
    CGTACAAGAG TTTCCTTTTT GTAGATTTCC TTTTCCTTGT AGTATTGGTT
    ATCTACTTAT CTTGTAGTCT
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6722960 [Map]; Strand: w
      • AT1G19420.1 - [+] show detail - pseudogene, CHP-rich zinc finger protein
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET13672 - 5-prime edge
    ACTTTCTCCC TGGTCTCATT CTGGCCCAAA AGGAGTTAAC AGCCCGATTT 
    CGATTTATAA GTCAAAGCCC AATCTGTTGA AAATGAATGT TCTGGAGAAA
    GGACAGATCA TCACATTAAG CAGAGGGAAT TGGCCGGATT ACCCTCGTCG
    TACGCCCTAA ACAAGCGGCT ATAAATAAAG AATGGAAAGA AACGTTGATG
    GGACGGGAAA AGGGGCTCTA ATACAACGAC AGTACGACTA CAAGTGAAGA
    AAAGGTTGTT GACGCCCTCG TTCGACGAGC TGAACCCTGG AGGAAAGATC
    GCCCCGACCT CAAAACCGTT GACGCCCTCG TTCGACGAGC TGAATACTCG
    AGGAAGGATC ACCCCGACCT CAAGATCGCC ACTCCCACTC TTCCCCGTTC
    CGAAATCGTC TTAACGAACC TGACGTTGCA AACAAATCCA AGTCAAAGGC
    CTAAGCAGAA TGTTAAGTCA AGAGGGTAGG CTCGTCAAAA CCCTGGAGGA
    GTGCCCTACA CGCAGAAGCC TATAAATACA GAATAGCATG TCTTGTCAAA
    AAGGGGGATT CGGCGAGGAC ACTTAGAGAC AAAGAGCAGC TCGTCAGCTC
    ACCCGTCTGA AGCATCTCGT CAGCCGGTCC GTCTCAAGTA GCTCGTTAGC
    TCACCCGTCC GAAGTATCTC GCCAGTCGGC CCGTCTCAAG TAGCTCGCCC
    TTCTAAAGTA GCTCGTCAGC TCTCCCTTCT CAAGTAGCTC GTCAGTTCGT
    CCGTCTCAAG TAGCTCGTCA GCTCTCCCTT CTCAAAGTAA CTCGTTAGCT
    CGCTCCTCTT C

AT1G19420.1

Model type
Pseudogene
Computational Description
pseudogene, CHP-rich zinc finger protein
Link
InterPro Scan - TAIR

AT1G76230.1

Model type
Protein coding
Computational Description
unknown protein; Has 26 Blast hits to 18 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR