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ET13681

CSHL Arabidopsis genetrap mutant lines

Original: ET13681

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13681

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11444495 [Map]; Strand: c
      • AT1G31880.1 - [+] show detail - DZC (Disease resistance/zinc finger/chromosome condensation-like region) doma...
        Distance: -995; Region: promoter
    Flanking Genome Sequence: ET13681 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTCTTT AAAACTCTTT 
    TGACATTTCA CTTCCTTCGT AATTTTCACG TATATGAATG AAAATAATAA
    AATTTATAAG AAATCTTCGT TTAACATTTC TTTTCTAAAA AAGTCATTAC
    ATGCATGAGA TACTTACATA TGCAATTGAA GAAAACAAAA TTACACTAAA
    GATATTTCTT CCAAAATACA TTAACACATC GTCAATTCTG CAAGCTCTTC
    TATAGAAATC TCTAAACCTA GCATAATTTG GTTTAACGAG TCAAGAAAAG
    ACAATTTCTT TTTTTTTTTA AAAAGGGGGG GGCCCTTCCC CTTTTTTTTT
    TTTTAAAAAA ATGGACTTGG CAAAAAAACC CCTCCCCTGG GGAAAAAAAA
    AAAAAAAAAG TGGAACCCCC CAAAATTAAA AACCCCCCCC CCCCGGCCAA
    AATTAATCCC GGGTTGGGAA CCTTTTTAAG GAAAACCTTC AACTTAACCT
    TTCCCCCTTA TTTAAAAAAC CCCCAAGGGC CCAAGGAAAA AAATTCCATG
    GACCAGTTTT TGGTTTTTTT CCCAAACGAG GGTTTTTTAC CCCTTTTGGG
    GAAACCTTCC CCCCAAAAAT TGGCCCCCCT GGTTTTTCCC CAAACCAGGC
    AAAACGGTGA AACCCCCCTT TTTTTTGGTT TGGAAAATAA AAAAAAAAGG
    GTTGGGGGAA GGGCCCCCCC CAAAGGGA

AT1G31880.1

Model type
Protein coding
Short Description
DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein
Curator Summary
Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth.
Computational Description
BREVIS RADIX (BRX); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 1 (TAIR:AT2G35600.1); Has 707 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 705; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR