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ET13685

CSHL Arabidopsis genetrap mutant lines

Original: ET13685

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13685

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5175690 [Map]; Strand: c
      • AT1G15020.1 - [+] show detail - quiescin-sulfhydryl oxidase 1
        Distance: 0; Region: intron1 (CDS)
      • AT1G15020.2 - [+] show detail - quiescin-sulfhydryl oxidase 1
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13685 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGG 
    TCAATGTCAG TATACAAGCC TTTCGCATTT ATACATAAAG TTAAGTTATT 
    TCCGGATAAA TCTCAGAGAA TTGGATAACG TAAAGTCAGG TTCGAATATG 
    AAGGACACTT GCAAACAAAT TCCGTGTAAG ATCCAGTGCT AAAAAGCCTA 
    AAGTTCGAAA TTTTTTCAGA TTTTTTACGA GAGAGAGAGA GAATGAGAAA 
    ACTGACCAGT GAGCGAAGAA CTCTAAAACG GCATATTTGG CGGGGGAATC 
    TTGGAAAACT GAATCAAAGT TGGTAGCGTT CAATTCGATA GCGTTGTCTT 
    TCTGATCGGC GATGTTACTG CCGATGTCCC GGAGAATCGA GCGCGATCCC 
    GGTGAAAACG ACGCCGCAGC TTCAAGGCTC AGCAGACCCA ACAACAAGAA 
    CAAGTGTATC AAAGACATTA AATCGAATAA AGCATACAAA TTTTGAAGCT 
    TGATCCGGAT GAGAGGGAAG ATCTAAGAGC CAAAAGAGCT TCCCTCCTTC 
    CGTTGAGAAA CGAAGGTCTC TGGTGTTTAT TACGACGTCG TAACGCCTTT 
    GACCGGCGTC GATACTTTGT TCTCTTCCGA CAACTTTCAT ACTGGGCTTT 
    ATTATAACGT TATAGGCCCA TTAATAATTT TCATTTGTGT TTGTGTTTGT 
    TATTACTTTG ACCCGCCCAA AAAGAAAGAA TTGAATGTAG ATAAGATAAC 
    GCTATCCCTA GTCAGTACTC AATAG

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5175614 [Map]; Strand: c
      • AT1G15020.1 - [+] show detail - quiescin-sulfhydryl oxidase 1
        Distance: 0; Region: intron2 (CDS)
      • AT1G15020.2 - [+] show detail - quiescin-sulfhydryl oxidase 1
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: ET13685 - 5-prime edge 
    CATAATTTTT GTTTGGCTCA AGGTGCCCTG CATGTAGAAA CTACAAGGTA 
    ACAACGCCAT TCAATGTCTT ATTATTCAAT GCTTACTCTT GTCAATGTTG 
    TTTATATCCA ATGGGTGACT CTGCTGCAGC CACATTATGA AAAAGTTGCA 
    AGGCTATTCA ATGGAGCAGA CGCAGTATAT CCTGGTGTCG TTTTGATGAC 
    CAGAGTTGAT TGTGCGATAA AGGTACTTGC ACCATCTTTT TTATTTATAT 
    AGATGAACGT GTATCTTGAC CTTCCTTTCT CTTTTTTCTC TTACTTCATC 
    TCACTCGA

AT1G15020.1

Model type
Protein coding
Short Description
quiescin-sulfhydryl oxidase 1
Curator Summary
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.
Computational Description
quiescin-sulfhydryl oxidase 1 (QSOX1); FUNCTIONS IN: thiol oxidase activity, zinc ion binding; INVOLVED IN: response to cation stress; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Zinc finger, RING-type (InterPro:IPR001841), Erv1/Alr (InterPro:IPR006863), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), ERV/ALR sulphydryl oxidase (InterPro:IPR017905), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: quiescin-sulfhydryl oxidase 2 (TAIR:AT2G01270.1); Has 2363 Blast hits to 1967 proteins in 298 species: Archae - 18; Bacteria - 44; Metazoa - 1234; Fungi - 321; Plants - 442; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G15020.2

Model type
Protein coding
Short Description
quiescin-sulfhydryl oxidase 1
Curator Summary
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.
Computational Description
quiescin-sulfhydryl oxidase 1 (QSOX1); FUNCTIONS IN: thiol oxidase activity, zinc ion binding; INVOLVED IN: response to cation stress; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Zinc finger, RING-type (InterPro:IPR001841), Erv1/Alr (InterPro:IPR006863), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), ERV/ALR sulphydryl oxidase (InterPro:IPR017905), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: quiescin-sulfhydryl oxidase 2 (TAIR:AT2G01270.1); Has 2372 Blast hits to 1975 proteins in 299 species: Archae - 18; Bacteria - 46; Metazoa - 1235; Fungi - 321; Plants - 448; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink).
Link
InterPro Scan - TAIR