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ET13686

CSHL Arabidopsis genetrap mutant lines

Original: ET13686

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13686

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3374667 [Map]; Strand: w
      • AT5G10690.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing pro...
        Distance: 0; Region: exon11 (CDS)
    Flanking Genome Sequence: ET13686 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGG 
    GATCAGGGTG CTTCAAGGTG AGCGTGAAAT GGCAACAGAC AACAAGCTCT 
    TGGGAGAATT TGATCTAGTT GGCATTCCAC CATCTCCAAG AGGAGTCCCT 
    CAGATCGAAG TGACATTTGA CATTGATGCC AATGGCATTG TCACTGTTTC 
    CGCCAAGGAC AAGACGACTG GTAAAGTACA ACAGATCACA ATCCGATCCT 
    CTGAGTGTTG CGCCTTCCAA GACGAGCACC ATCAATTCCA AATGAGTTGC 
    TACTGATACA GATTTAGTTC TTTCAATATA TTCACTTTTG TCAGAAAGAA 
    AATGAACAAG AAACAAAACC TTGTTCCCTA ACCTTGTTCT TCTTCGAGTT 
    CTCTTGCAGC CTATGCTGTT GGAGATTCCT TCTTCCCTTG CACCCCTTCC 
    TTCTTTGTTC CTTCCTCTGG GAATTCTTCT ATTTGAGCCT TTGTTTCGGC 
    TGTTTCTTCT TTCACTCTGC TGCTTTCGCT CTCTTCCTCT TTAACTTCTG 
    CTTCTTCCTG TTCCTCTTGT TTACTTTTTT CGAAATTCAC AGCTTCATTC 
    ATATCTGTAG TAGTAGCAAC TGTCTCGCTA TTTTCCTCAT CATCAACTTT 
    CTTGCTATCA AACTCCTCAT AGATCTCAAT CTTCTTGCTA TCGACCAACA 
    CTTCTCGTCT CTTCTGCCTA AACCCGCGGA ACAAATCACT CGTCTCATCC 
    AAAACCGAAA CATACTCAGG CTGGTGGCTC TCAAACTTAT ACTCCTCAAT 
    GATCTTCAAC TCTT

AT5G10690.1

Model type
Protein coding
Short Description
pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein
Computational Description
pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR