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ET13692

CSHL Arabidopsis genetrap mutant lines

Original: ET13692

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13692

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5093440 [Map]; Strand: c
      • AT1G14780.1 - [+] show detail - MAC/Perforin domain-containing protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: ET13692 - 3-prime edge
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGCCCGTTTT CATCCCTAGT 
    CACCGGAGCA CATGCTCGAA GTGAAAAAAC ACGGCTCAAA ATCTGTTCTC
    CATCTCCGAC TCCGTTACAC TAAAGTCTCT GATCATTACG TCGTTCAGAA
    TAGTTGGGTT CATGGACCAA TTGGGACTTC TCCTAAATCG GGAATCTTCT
    CTTCCATGAG CATGCCGTTG ACTAGTGGGA GTGTTCATCA TAGAATGATC
    CAAAAAGACA AAAACGAGGT CGGTTTGGAT TCAGGTGGCT TCCCTGGAGG
    ACCTCCTGTG CCGGCGAATA ACAAGATAGT GAAATTCGTC GATCTTTCGC
    AGATATGTCC AGGACCTCAA CATAGTCCTG GTCATTGGTT AGCCACTGGA
    GTGAGGCTTT ACTTGGACAA GGGCAAACTT TGCTTACACG TCAAGTTTGC
    TCTGCTACAT CGCCAACGTC TTCTCTTTCA CTCGACCAGN AAGGGGTTTC
    AGAAGCGGTA CGGAAACGTC GAGAGCCGCA TTTACAGACT CGGCTTTGCG
    GATCATATAC AGCTTGAAAT CAAAAGCAGA GTTGTTATCG TTGCTTTTTC
    CCTCTGGTTG AATCATGTGC CCTGCGTCTT GTGAGGTGAG GGCAGAAGAG
    AGAGATAAAA CGGTGCGTTT TCGGAGACTC TTGACGGAAG ATATGGAGTT
    GTCTCTTCTT CCTCTGGATT GGCTGAAGAG GGAGGATGAG CTGAGATG
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4879689 [Map]; Strand: c
      • AT3G14530.1 - [+] show detail - Terpenoid synthases superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13692 - 5-prime edge
    ACTTTCTCCC TGATAGGGAC TACGGGCTAG TTGCTGGACA AATGATAGAC 
    CTAGCCAGCG AAAGACTGAA TCCAGACAAG GTTGGATTGG AGCATCTAGA
    GTTCATCCAT CTCCACAAAA CGGCGGCATT GTTGGAGGCA GCGGCAGTTT
    TAGGGGTTAT AATGGGAGGT GGAACAGAGG AAGAAATCGA AAAGCTTAGA
    AAGTATGCTA GGTGTATTGG ACTACTGTTT CAGGTTGTTG ATGACATTCT
    CGACGTAACA AAATCTACTG AGGAATTGGG TAAGACAGCC GGAAAAGACG
    TAATGGCCGG AAAGCTGACG TATCCAAGGC TGATAGGTTT GGAGGGATCC
    AGGGAAGTTG CAGAGAAACT GAGGAGAGAA GCAGAGGAAC AGCTTCTAGG
    GTTTGATCCA AGTAAGGCGG CGCCTCTGGT GGCTCTTGCC AGCTACATTG
    CTTGCAGACA CAACTGATAC TTTTCATGGA CTGATCAATG CATCTAATCT
    TCTAACAAGT CCTTTTACTT GGATCTATGG TCTTGTTTTT TATAAATCAT
    CAATGCTGTG TGATCATCTC TCTCATGTGT TTTCAAGTTG TATTATGTTT
    TTGAATCTTA ATAATGTAAT GTTGGAAAAA TATCAATACG GTTTGCTCAT
    AGGAACTAAA TCTTAGCGTA AGGATTCGGA CAAAT

AT1G14780.1

Model type
Protein coding
Short Description
MAC/Perforin domain-containing protein
Computational Description
MAC/Perforin domain-containing protein; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 221 Blast hits to 220 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14530.1

Model type
Protein coding
Short Description
Terpenoid synthases superfamily protein
Computational Description
Terpenoid synthases superfamily protein; FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: geranylgeranyl pyrophosphate synthase 3 (TAIR:AT3G14550.1); Has 16918 Blast hits to 16911 proteins in 2965 species: Archae - 341; Bacteria - 9533; Metazoa - 310; Fungi - 484; Plants - 460; Viruses - 12; Other Eukaryotes - 5778 (source: NCBI BLink).
Link
InterPro Scan - TAIR