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ET13696

CSHL Arabidopsis genetrap mutant lines

Original: ET13696

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13696

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6705030 [Map]; Strand: c
      • AT4G10925.3 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: -385; Region: promoter
      • AT4G10925.1 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: -427; Region: promoter
      • AT4G10925.2 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: -408; Region: promoter
    Flanking Genome Sequence: ET13696 - 3-prime edge 
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    ACAAGAATTG CTTCTCTCGC CCTAAGAGAA GAAGACTCAG TTTCCAAAAC 
    CCGTGGAGAA GACAAAAGAG AGATACTAGT TAAAATCTAT TTACGTTTTT 
    GTACTGAACT ACTTGTTACT TCATCTTCTT ATTTACGCCA TCTGATTTTC 
    TCACTTGCAC TTATCCTTGT GGTGAGCTCC AGAGGAAGCG GTTTCGACGT 
    ATTGCTCGGC AAGTTTCTTG ATCTTGTCTC CTTCTTTGAT CAAGAAGTTA 
    GCACTCTTGG CTTTGCTATG ATACTTCATC ACTTTTTCTG TGGTTTTAGT 
    CACTGCCCAT CTGTATTGTT CCACGTTTAT CACTCCGCTC TTGCACAGTG 
    GTCTAATATG TTCTTTGATG TATGCTTCCA CCTGACAAAA ACAATAAAAC 
    CATTGAAGAG TGAAGACAAA GGGAATGAGA ATTTTGACAT GACAGAGACT 
    TTTACAGTTT TTAGTACCTT CTTGGTGATG GAGTTACCAA AGCCATCAGC 
    TTTGCCTTTT TCCTCTTTAG ACGGCTTTTC GCTTGGTTTG CACTTTTGAA 
    TGCTTCTGGG AAGTTTTTTC TCTTGAAATG CAGTGATTTC AAAGTTTGAA 
    GCGATGAACT CTCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6704975 [Map]; Strand: c
      • AT4G10925.3 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: -330; Region: promoter
      • AT4G10925.1 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: -372; Region: promoter
      • AT4G10925.2 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: -353; Region: promoter
    Flanking Genome Sequence: ET13696 - 5-prime edge 
    CTTTCTCCCT GATTCTTGTT GTACCCCGAA CCAGATAGAC CTAAAATGTG 
    TCTGAAACTG AGATTTACTT GGTCGCTGAC AGGTTTTTGA AAAAATATTT 
    AGAGATGAAA ATGATATATT TATTATTAGT TACATACTTT TTCGTCACTG 
    TGATTATTAA ACTGAACTAG TAAACTTAAA AGCTAAATGT AAAAGAAGAT 
    GATGATAGTT TGTTTGGGTC AAAGGCTCAA AGCAATGAAA TTCTTAAAAT 
    GCCTATTGGG CCTAACCTGA CGCATTTCTT TATATTTTTG AAAATTGTTA 
    AACGACGACG TATCTGTTTT CTATAGTGAC TCTGACGCAC TTGGATAAAC 
    ATACATGTGC AATGACTATA ATACCCTTGA AACTTGAGGC TATTTCCTAC 
    AGTGACACAT TTTGATAAAC ATTTGCGATG GTCAGTTACG GAGTTGGAGA 
    CAAAAGAGCT TCTGAATCTC TCTCTCTTCT GCGTCTCGCC AAATTTATTT 
    CCCGATTCAA TTTGTAGGGT TTCTGCAGAA GAAGGAAACC ACCATTAAAC 
    CCTAAGTACG TCACCTTTCA AGCTCCTTCT TCTGTAGGTT TTTTTTGTTC 
    TTCTGATTCA TGTTTACAAA GTTTTT

AT4G10925.1

Model type
Protein coding
Short Description
Nuclear transport factor 2 (NTF2) family protein
Computational Description
Nuclear transport factor 2 (NTF2) family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G10925.2

Model type
Protein coding
Short Description
Nuclear transport factor 2 (NTF2) family protein
Computational Description
Nuclear transport factor 2 (NTF2) family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1); Has 202 Blast hits to 202 proteins in 57 species: Archae - 0; Bacteria - 78; Metazoa - 1; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G10925.3

Model type
Protein coding
Short Description
Nuclear transport factor 2 (NTF2) family protein
Computational Description
Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1).
Link
InterPro Scan - TAIR