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ET13697

CSHL Arabidopsis genetrap mutant lines

Original: ET13697

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13697

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19002993 [Map]; Strand: w
      • AT5G46830.1 - [+] show detail - NACL-inducible gene 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13697 - 3-prime edge 
    CTCCCGAATA ACATTACTCC GACGCTCTTT CTCCTCCGGA GACGACAGAA 
    TCGTCTTCAT CCTCCTCAAC CTCGCTCGAG TCTTGTCCTC GTTGCCACCA 
    GTGTAAACTC CGTCGCCCCA TTTGAGAACT GCTTCACCGG AAAAGTCATC 
    GTACGACGGA TTCCAGAAAA TGGCGTAACT CCAGGGCTCG TGGGTTCCAT 
    TCACCACAGC ATGAAAACGC TTCGGGAGAG TTGTCTCGAG GCTGAGATTC 
    GCCGGAAGTA ATGGTGGCGA C

AT5G46830.1

Model type
Protein coding
Short Description
NACL-inducible gene 1
Curator Summary
Calcium-binding transcription factor involved in salt stress signaling.
Computational Description
NACL-inducible gene 1 (NIG1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: Basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT1G32640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR