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ET13700

CSHL Arabidopsis genetrap mutant lines

Original: ET13700

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13700

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23636993 [Map]; Strand: w
      • AT1G63720.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein ...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13700 - 5-prime edge 
    CTTTATCCCT GGTTGTGATA ACCGAACGAT AACCGGAATT TGATGTTGTT 
    GAATTTGAAG AAGACATTGA TACCGGTTCA GGAACAAGAA CCGAGTTTCC 
    TATTCGTTTT CTTTGTCTTG AAGATCCGAA ACATTTCAAC AGACTCCATC 
    GATTCCACCA TTTTCTCTTC TTCTGATTTC AAAAAGCATC AAAATCAGAT 
    TCGAGAAATC GAAATCACAG AAATCGAAAA TTGCATACAA AGTGTTCGAT 
    CTAATGCTTA AGAGAATAAT CATACATGAA AGTTTCTGAT TTAGCTAATT 
    GAAACGGAGA AAGAAGACTC ACATGAATCG GAGAAGATTG ATGAAGACGA 
    TCATCAGAAG AAGCAATAGC AGAAGCAGCT GCGTTTATAG TATCGAAAAC 
    GTTGTTTCCA TTAGCACCGC TTCTCATCTT TCTCTCCTGT TTTTACTTTT 
    CTCTGAGTCT GAGAATTTTC TCGAGAGAAC AAAACAGAGC ATTCGAGTTT 
    TTCTCTAGTA AAAATCAAAA ATAATACACA GAAAGCTTCT TTAACAATCA 
    AAATCTGAAA AATCGTTTTA CAAATAAAGC GACACGTAAC CCCGAAATTT 
    CTGGGAATGT TATTGTTTCT CTTCCAGAAA AAACATATAT ACATGTATAT 
    GTATATGTGT GTTCGTGTGT ATGTGTGTGT CAGGGTTTAG GGTCAAACAC 
    GGCAAAGACA AAAGTCTTTG TAAATATACG ATCTTTAGGG GTAATTTTGT 
    CCATTGCACT TGCGAAAAT

AT1G63720.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in 96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79 (source: NCBI BLink).
Link
InterPro Scan - TAIR