1. Home
  2. Mutant Lines
  3. ET13702

ET13702

CSHL Arabidopsis genetrap mutant lines

Original: ET13702

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13702

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 8159311 [Map]; Strand: c
      • AT3G22970.2 - [+] show detail - Protein of unknown function (DUF506)
        Distance: 5162; Region: intergenic
      • AT3G22980.1 - [+] show detail - Ribosomal protein S5/Elongation factor G/III/V family protein
        Distance: 845; Region: intergenic
    Flanking Genome Sequence: ET13702 - 3-prime edge 
    TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    CCAAGAGAAT CCAAAATGCA TGAGGAGGCA ACATAAAATC TCAATTCTCA 
    GACTTTTAAT GGATTCTCTT ATTGAGTAGA TCTTTAAACC AAACTTAACT 
    ATCAGATTCA AAATATCAGA CAGCTTGCAA ACTATTATTA GTATGAACAA 
    AAATGTATTT TGAAAACGAG ACAAATAAAT GAACAAGCAA CATTGAAGCT 
    TCATTAACTT CTCTAATCTA TAAAACTGTG TTTATCTGTT CTAGAAGCAA 
    AAGCACTGAC AGCTAGGAAG AGTGTCATGA CACTCTCACC TTAATGGTAC 
    TCAGAGGTTT ATTCATTAGA AACCTATTTA CAGAAACTGA AAATATATCG 
    TATAATACTA TTTAATACAC ACATATTGAT TGTTTAGAAT TAGTATAGGA 
    TAATTAAAGC TACAAAAAAA TGT

AT3G22970.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF506)
Computational Description
Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT4G14620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G22980.1

Model type
Protein coding
Short Description
Ribosomal protein S5/Elongation factor G/III/V family protein
Computational Description
Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink).
Link
InterPro Scan - TAIR