1. Home
  2. Mutant Lines
  3. ET13709

ET13709

CSHL Arabidopsis genetrap mutant lines

Original: ET13709

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13709

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19003238 [Map]; Strand: w
      • AT5G46830.1 - [+] show detail - NACL-inducible gene 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13709 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC TCTATCGAGG 
    AGGAAAATGC CGCAATGCTC CACGTTTTCG GATGGCGTTT CGGATTCGTC 
    TTTACGGAAA CACGGACACT CAGAAGCCCT TTTCGTGTCT GTCGACCAAG 
    AAGAACCACT CCATATCCGT CACTTCCACG TCATCGTCGT CACTGACGTC 
    GTGTTCAACC ACCGGAAACG CTTCGCCGGA GATCGTCAAG TTAAGCTCCG 
    GAATAGCATT GCTCCGACGC TCTTTCTCCT CCGGAGACGA CAGAATCGGC 
    GTCTTCCTCC TCAACCTCCC TCGTGGCTTT TCCTCGTTGC CACCAGTGGA 
    AACTCCGTCG CCCCATTTGA GAACTGCTTC ACCGGAAAAG TCATCGTACG 
    ACGGTTTCCA GAAAATGGCG TAACTCCAGG GCTCGTGGGT TCCATTCAAC 
    ACAGCATGTA AACGCTTCGG GAGAGTTGTC TCGAGGCTGA GATTCGCCGG 
    AAGTAATGGT GGCGACGGAT CGGAGGTCAA GAGAGCTTCG ATCATCAATA 
    AGTTATCGTC GGTATTAATC ATCGTTGCCG GAGTATTAGA AGTCGTCTCA 
    AGTCTTTGTA TTTATATATC TAAACTAAAC GAGAAACTAT AGAGTATA

AT5G46830.1

Model type
Protein coding
Short Description
NACL-inducible gene 1
Curator Summary
Calcium-binding transcription factor involved in salt stress signaling.
Computational Description
NACL-inducible gene 1 (NIG1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: Basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT1G32640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR