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ET13711

CSHL Arabidopsis genetrap mutant lines

Original: ET13711

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13711

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1573175 [Map]; Strand: w
      • AT3G05440.1 - [+] show detail - C2 domain-containing protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13711 - 5-prime edge 
    CTTTCTGCCT GGTTTAGGGT TTATATTTGG ATGTATTTTT AGGGGACAAA 
    TCTGAGGATG TAATTCGGAT ATTGCTAGGG TTCATGAGGG TTGTAGATTA 
    GGAGTTTGGG GAAATATTAG ACATGAGCCA TCAGCTCCTT GTGAAGATGA 
    TATCTATGCT TAGAAATTGA TTACTTCGAT TATTTCCAAT AATTTTATAT 
    CTTGTTATTG TTGTATTATT TGATATGTAT TTCATCATAC TGATCATAGT 
    CAACAAGATA GAAAGAACTC AAACGCGTTA GAAAACGAAA ACAAAAATCT 
    CAACATAAAT GATTTAACTT TGACGTATTG AGTTGAGCCA AGAAACCCGA 
    GTGAGATGGT TTTGACTTTG ACGTATTGAG TTGAAACCCA TGCACGCATA 
    ATTTTTAGAA GGTTTATCAA GATTCCATCA ATTTACAAAA TGACAAAGAA 
    CACTGAAAAT TCAGTTTCTG TTTAATATAG TCAAAAAGAT TTGGACATTG 
    GTGACCATTA GTTATTGTGG TATTTAAGGA TTGTTTGTTT CAAATATTTA 
    ATGCTTAGCA GTGTAAACTA GCTACTCCCA CAGATGGGAT CCATTCCCGT 
    TTACGTTTTT TTCTCCGGTT ATGTTCACGG CTATTTTTAT TTTGGTCAAC 
    ATCTAAAATG GTTTATTTAT AGATCCTTAT GACTG

AT3G05440.1

Model type
Protein coding
Short Description
C2 domain-containing protein
Computational Description
C2 domain-containing protein; CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: soybean gene regulated by cold-2 (TAIR:AT1G09070.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR