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ET13716

CSHL Arabidopsis genetrap mutant lines

Original: ET13716

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13716

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21728 [Map]; Strand: w
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13716 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATCTGG 
    GAGGATGATG AAAGAGCAAG GGCCTTTAGT GCGGATATAA CCAAGCATCT
    GAAGGAGGAT TTGGACGAAC TTGGGATCAA CGACGGTGAG GTGAGAGAGG
    CGCTGGTGGA CGCTGAGAGA AGAGAACCAT CGGAGGATCG CCGACCTAGG
    ATTGGGGATA GTATTAGCCA TTGAAGAGGA AGAAGAGTGG GAGTGGTACA
    AAGATATGTG AGATGTTAGC GAATCGATAA GTTGATTCTG AGCCATGGAT
    GAAGCAGAGG AGAAGAATTT GGAAGGGAGA TGGCGATTTT CCATTGTTTC
    CTCTCTTTTT TTCTTTCTCC AGAGGAAGAC GACGAACGGC TAATAACTTA
    AACCAACTCA ATACCCAACC GGAAATTGGA ACCGGTCTTA CTTGCTAACC
    AATCAATAGG AGTCTATTTA AAACGGGCCT GGGCTTGAGC CCATTGTAAA
    TTCTCGATGC TCTT
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21783 [Map]; Strand: w
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13716 - 5-prime edge
    ATCCTACTTA ATCCCTGCTC CCGACCTCCC TTCCTCCTCC GATCTCCCCA 
    GTCTCTGCTT TAAAAATCTC GTGGCTTAAT CTCCAGGGTT TCCGAGTCCA
    ACGAGTCAGA GCGTTTCGTT TTCGACTCTA CTCGGCTCTT TGGTTCTGGA
    GAAGGGGAAA GGGCTCAAGA TTGCTCTTGC TCCGTCAATT CCCTCGATTC
    TGTCGTCATG GCCGAGGAAT TTCTTACAAA TGTGGATCGT TTCGTGGAGA
    CTATGGACGT CTTATCGGAT GGAGCATTTC TGAGAGGAGA AGAGAGTGAT
    TTGGGGTCCA ATTGGGTAGA ATTAGAGTGG CTCAAAGCCA AAGGCTATTA
    TAGCATGGAA GCCTTCGTTG CAAATAGGTT AGAGGTAAGC ATGAGATTAG
    CTTGGCTGAA CACAAATAGT GGCAAGAGAA GAGGAATCAA ATTGAAAGAG
    AAATTGAATG CTGCTGCTGC GGCTGCCAAT TCGTATTGGA GGAAGAAGGC
    CTGTGTTGAT TGGTGGCAGA ATTTGGATGC CTGCACACCA CAAGAAAATC
    TGGACTTGTT TGTTTGGGAA GTCGGCTAAA

AT4G00060.1

Model type
Protein coding
Short Description
Nucleotidyltransferase family protein
Computational Description
maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR