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ET13719

CSHL Arabidopsis genetrap mutant lines

Original: ET13719

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13719

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16437435 [Map]; Strand: w
      • AT3G44970.1 - [+] show detail - Cytochrome P450 superfamily protein
        Distance: 2587; Region: intergenic
      • AT3G44980.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -3588; Region: intergenic
    Flanking Genome Sequence: ET13719 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACAT 
    CCGTCCGTAC AAATAAAGAA AAGAGGCCGA GTGTTGTGTG TAAGCTACAA 
    GGTGTTGGGC CGAACACATT GAGAAGCCTA TAGGGAGCTT CTAGAATGAG 
    TGAAGGCACA CAAATATCTC TTGTAGCCGT TGAAGAGAAC TCACGAGTGG 
    TCTTAGCTTC ATGGTCAACC AAGGACCGGT CACTCTCACC ATTAAGACCA 
    AGGAATCTCT TCTCTCATGT CTCTTTCATT CGCATGTTAT GTGTAAACGG 
    CTATGTTCCC TTTGTGTGTC CTTAAATACA ATGTAAACAC ACAAAGGTAA 
    CTAACCAATT CTAGTAATAT GTTCTGTTCA TTCTCACACA TAACAATGCT 
    CTCTTGTTCT TCATGATTCT CTTACCCTTA CTCTTACTCT TTCCAAACTA 
    CAATTCCGCA TAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9599706 [Map]; Strand: w
      • AT3G26230.1 - [+] show detail - cytochrome P450, family 71, subfamily B, polypeptide 24
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13719 - 5-prime edge 
    TGCTCTTTAT TAGGTCTTGC TCAATACTTC GGTCGATGAG ATCACAACCA 
    TATCGAGAAA ACCTAGACGG AGAAGCAACA CGGGTCCATG TTTCTTGGAG 
    AGATCGTGAA GACATTTGTG AAACAATCCT CGAAGCTGGT ATAGGTTTCC 
    GATAACCGGT AGCTTCAGTG GGCTCGGAGG AAGATTTCGG TTCGAGTCTT 
    TGATTTTCTT TATGATTATT AACGATAAAA GAGCGATGAA GTACAGAAGA 
    ATCGACATTG TTTTCGTTTT CTTATGTTTA TGTGTTCTGT TTTTTGGTGA 
    TAGAGAAACA TAGTATTCAG ACTATAAAAC AAATAGAGTT AACAACGTCT 
    TTACCATGGC AACATAAGTC AGAGTCAATA GAAAAAGTCA TATGTCATCT 
    AGTATTTCTG AGGATAAGCT TCGAAAATTG ACTTCAAAAT ATGTGAACAC 
    CAATCTACCT TTCAAAAACT ACTAGGACAC TAATCCTAAA TCTACGTTCG 
    AAACTATTCA AACCGGTAGC AAACAAAAAA GAACGAAAAC AATTTATCTG 
    AATGATGTCA TCTCTTTTTT TT

AT3G26230.1

Model type
Protein coding
Short Description
cytochrome P450, family 71, subfamily B, polypeptide 24
Curator Summary
putative cytochrome P450
Computational Description
"cytochrome P450, family 71, subfamily B, polypeptide 24" (CYP71B24); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 3 (TAIR:AT3G26220.1); Has 33577 Blast hits to 33331 proteins in 1707 species: Archae - 48; Bacteria - 3554; Metazoa - 11980; Fungi - 7136; Plants - 9645; Viruses - 6; Other Eukaryotes - 1208 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44970.1

Model type
Protein coding
Short Description
Cytochrome P450 superfamily protein
Computational Description
Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, shoot, cotyledon, hypocotyl, leaf; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 2 (TAIR:AT5G48000.5); Has 31585 Blast hits to 31508 proteins in 1695 species: Archae - 52; Bacteria - 6275; Metazoa - 10768; Fungi - 5445; Plants - 7650; Viruses - 6; Other Eukaryotes - 1389 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44980.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07215.1); Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR