1. Home
  2. Mutant Lines
  3. ET13722

ET13722

CSHL Arabidopsis genetrap mutant lines

Original: ET13722

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13722

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21427418 [Map]; Strand: w
      • AT1G57850.1 - [+] show detail - Toll-Interleukin-Resistance (TIR) domain family protein
        Distance: 69; Region: intergenic
      • AT1G57860.1 - [+] show detail - Translation protein SH3-like family protein
        Distance: 2480; Region: intergenic
    Flanking Genome Sequence: ET13722 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTCGCT ATGTTATCAC 
    CTGATTAAAA CTACATGTAC AAATTGCATG TTATTTGACC AAAGGAAGAA 
    AAAAAACATA AAAGCAGAAG CACTAGTAGT ACCTTTTGTC TCCCAAGGAC 
    AGGCCCATCT TGTTGGAAAT ACACTCTAGC GCTTCCTTCC ACTTCATGAT 
    CTGATCTCCT CGAGAAGTTC TTGCAAGCGC CCAAAACGTT TCACCAAACT 
    CACCGGTCTG TCCTCTCACA TCTCTTGCCC TAACCTTGTA GAAGATGGGA 
    ATGACTTGGA GCATTCCTTT ATCCGCACGT TTCT

AT1G57850.1

Model type
Protein coding
Short Description
Toll-Interleukin-Resistance (TIR) domain family protein
Computational Description
Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: leaf lamina base, leaf whorl, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain family protein (TAIR:AT2G03300.1); Has 1603 Blast hits to 1538 proteins in 50 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 0; Plants - 1595; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G57860.1

Model type
Protein coding
Short Description
Translation protein SH3-like family protein
Computational Description
Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: juvenile leaf; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L21e (InterPro:IPR001147), Ribosomal protein L21e, conserved site (InterPro:IPR018259); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT1G57660.1); Has 1436 Blast hits to 1436 proteins in 381 species: Archae - 214; Bacteria - 0; Metazoa - 706; Fungi - 179; Plants - 136; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink).
Link
InterPro Scan - TAIR