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ET13726

CSHL Arabidopsis genetrap mutant lines

Original: ET13726

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13726

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5093436 [Map]; Strand: c
      • AT1G14780.1 - [+] show detail - MAC/Perforin domain-containing protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: ET13726 - 3-prime edge 
    AATGAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TAGTCACCGG AGCACAACTC GAAGTGAAAA AACACGGCTC AAAATCCGTT 
    CTCCATCTCC GACTCCGTTA CACTAAAGTC TCTGATCATT ACGTCGTTCA 
    GAATAGTTGG GTTCATGGAC CAATTGGGAC TTCTCAGAAA TCGGGAATCT 
    TCTCTTCCAT GAGCATGCCG TTGACTAGTG GGAGTGTTCA TCATAATATG 
    ATCCAAAAAG ACAAAAACGA GGTCGTTTTG GATTCAGGTG TCTTCCCTGG 
    TGGACCTCCT GTGCCGGCGA ATAACAAGAT AGTGAAATTC GTCGATCTTT 
    CGCAGTTATG TCGAGGACCT CAACATAGTC CTGGTCATTG GTTAGTCACT 
    GGAGTGAGGC TTTACTTGGA CAAGGGCAAA CTTTGCTTAC ACGTCAAGTT 
    TGCTCTGCTA CATCGCCAAC G

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5093387 [Map]; Strand: c
      • AT1G14780.1 - [+] show detail - MAC/Perforin domain-containing protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: ET13726 - 5-prime edge 
    CCTACTTTCT CCCTGCCGGT GACGATGAAA GCTACGTCGT TTTGGGACTT 
    GTGATTGCTT GTTGTTTTGA TCCAGTTTGG GTCGTACTTC ACTGGAACCG 
    TACACACGTG TGAGAATTTC TTACCGTTTA AAGGTTCGAA GTAGCGATCA 
    TTGTCGGTGA TTTGATCGGA GCCTCTCCAT ATATGTTCGT CAGTGATCTT 
    TTCCCCAACC GTAGTTCTTG TGTTGTCTAG GTGTTGTAGG TGTATAGCCA 
    GCCTATTGCA TTTCTTGCCT TCAAGGAAAA ATCGCATTCC GGTTACTGG

AT1G14780.1

Model type
Protein coding
Short Description
MAC/Perforin domain-containing protein
Computational Description
MAC/Perforin domain-containing protein; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 221 Blast hits to 220 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR