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ET13731

CSHL Arabidopsis genetrap mutant lines

Original: ET13731

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13731

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27226718 [Map]; Strand: w
      • AT1G72310.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13731 - 5-prime edge 
    TACTCACCGT CAGCGACGTC GTTTCATCTT CCTCCCAGGC CAAGACGCTC 
    TAAGCAACAC TGGACTAACC TCTTTTGAAC TTAGTTCCTT ACCAATTGTG 
    TTTTTCAGAC AAGATAGTTG CAAAGATGGT TTGGAATGCT CTATTTGTTT 
    GTCTGAGCTT GTTAAAGGAG ATAAAGCTAG GCTGCTTCCA AAGTGTAACC 
    ATAGCTTCCA TGTTGAGTGT ATTGACATGT GGTTTCAGTC TCACTCTACT 
    TGTCCGATTT GTAGAAACAC TGTTCTTGGT CCTGAGCAAG CTAGCTCAAA 
    GAGAGTTGAA CAAGTTCCAG ACAATGCAGA AAATGCTGGT ACCACCAATA 
    ACAACCATGA TGCTTTGTCT CAACTTTCAA CTTCTTCTCC AGAATTTCCC 
    ACCAATGTCT TGGTATGGGG TCGTCAGGAT CAAGTTAGTA CCGGAAACAC 
    CAATGTTGGG ACTCAAGAAG ACGGTGCTGC TGGTAATGGT GCTTCTCAGA 
    GTCAAGAAGC TGTTGTTCTG GATATCAGCG ATTCTTCCAG TAGAAATCAT 
    AATGTATCAT CTTCGTCGTC ATCTATGAGG TTTATTGTTG AGGAGGAAGA 
    AGCAAAATCT CCAATGACAA CGAGGTTGAG GTCCTTAAGG AGGTTTCTGA 
    GCA

AT1G72310.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Curator Summary
Encodes a putative RING-H2 zinc finger protein ATL3 (ATL3).
Computational Description
ATL3; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G53820.1); Has 10122 Blast hits to 10073 proteins in 295 species: Archae - 0; Bacteria - 0; Metazoa - 2687; Fungi - 787; Plants - 5131; Viruses - 60; Other Eukaryotes - 1457 (source: NCBI BLink).
Link
InterPro Scan - TAIR