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ET13737

CSHL Arabidopsis genetrap mutant lines

Original: ET13737

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13737

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15119382 [Map]; Strand: w
      • AT2G36010.1 - [+] show detail - E2F transcription factor 3
        Distance: -160; Region: promoter
      • AT2G36010.3 - [+] show detail - E2F transcription factor 3
        Distance: -160; Region: promoter
      • AT2G36010.2 - [+] show detail - E2F transcription factor 3
        Distance: -207; Region: promoter
    Flanking Genome Sequence: ET13737 - 3-prime edge 
    ACGGTAGAGG TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTACTTT 
    TAGTAACGGG AATATTGAGA TTCTTTTCTG TTCTTTATAA TGGTGAAGAA 
    GAGGAGATCA TGCATATATA TTTTTGATCT AGAACTTGTT TTTTGAATCT 
    GAAATTTTTA TTTAAATGTG TGTAGTCGGT AAACAGATTT CTGCAAATAG 
    ATTGGGATAG AGTTTGTTTA TAGTACATGT GCTGCTGTTT CCGTTATGAT 
    ATGTGTAATA ATATTTTTAT TTTTATTTTT TATCCTTTTG TATTGATTAG 
    TGGTTGTTGT ATCATGTATG GCAGTGGAAA AACTGATGCG AAGTGTAGAT 
    TAAGTCTAAA GTCACTTGAT GAAGGATTCA TAATTCAATT CAGTATTTGG 
    AGGACTATAA TATTGCACAT GATTGATGTC ATTAATTGGT ATTAACGACA 
    AATGAGTGAT AGAAAATAGT TAGAAAGGGT AAATAGAAAT TGGTAAAGAC 
    CTAGATTGGC AAAGTTTTCG TACCGCTTTT TTCTTGTCCT GCGCCGTTAG 
    CTTATTACAG GTCACAAGAA AAATGGTTCA C

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15119442 [Map]; Strand: w
      • AT2G36010.1 - [+] show detail - E2F transcription factor 3
        Distance: -100; Region: promoter
      • AT2G36010.3 - [+] show detail - E2F transcription factor 3
        Distance: -100; Region: promoter
      • AT2G36010.2 - [+] show detail - E2F transcription factor 3
        Distance: -147; Region: promoter
    Flanking Genome Sequence: ET13737 - 5-prime edge 
    ACTTTCTCCC TGACTAAAGG ACAAAAAGTA ATTTCCCTAA AGTAAGTAGG 
    GTCAATCTAA AACTAAATAC AAAATCCCGG GGCACAAATA GAAATAAAAA 
    AAAGTATATA TTTATTTCCT TAACATTTTA TTTATTATTG CTATAGGCTT 
    CCCTCCACAT CTATCCCAAC ATAAAATTCC CTCCTTCCCT CGTTTTCTGC 
    TCTCTCCTTT TCTTTTCTTC TTCCTCTTTC TCTCACTAAA ACCCTCGTTT 
    CCTTCACTCG CCGTCGCTTT TCCCGTCATC GGAATCTTCA AATTCGACTC 
    TCGCTTCACT ACGATCCATG TCCGGTGTCG TACGGATCTT CTCCCGGT

AT2G36010.1

Model type
Protein coding
Short Description
E2F transcription factor 3
Curator Summary
Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.
Computational Description
E2F transcription factor 3 (E2F3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: transcription factor complex, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36010.2

Model type
Protein coding
Short Description
E2F transcription factor 3
Curator Summary
Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.
Computational Description
E2F transcription factor 3 (E2F3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: transcription factor complex, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36010.3

Model type
Protein coding
Short Description
E2F transcription factor 3
Curator Summary
Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.
Computational Description
E2F transcription factor 3 (E2F3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: transcription factor complex, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 1 (TAIR:AT5G22220.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR