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ET13749

CSHL Arabidopsis genetrap mutant lines

Original: ET13749

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13749

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16708590 [Map]; Strand: w
      • AT4G35100.2 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: exon1 (5UTR)
      • AT4G35100.1 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: -8; Region: promoter
    Flanking Genome Sequence: ET13749 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATTTT 
    AGAAGGGGAA AAAGGAAACC CTTGTAATGC CCGGGATAAA CCAAGGGTAC 
    TTTCGGTATT ACGTACTATT TGTATAGTCT ACATAAATCT GCTTATAATC 
    ATTATTAGTA CGATTAAATA GTTAATAACC CTCTAAACTA ACTTAGTACT 
    AAAAATATAA ACTACTAAAT GTTCCTTGGA ACTTTCCAGT TTTAGTTAAA 
    ATCACATACG ATTAATATGC ATTATTACTG ACAAAATAAT AGTCAAAATT 
    ATCACGAATG TTCCTGCAAA ATAATAGTCA AATTTGTGTT TTAATGCATT 
    TTTTTCTCTT GCTAACATCA ATAGTTATAT GCATTATTAC TGGCCCAATC 
    AAATTTTTGT TCTTGTACTG TATGATATAG TGTATAAAAT AGCAATCAAA 
    GTGGGGTATA ATTTGCATGG CCAAATCTTT TGCAGTTCTG TAAAATGTGA 
    ATATTTTTCC TACTAATAAA TATGGAACAA TGGGATAAAT ACACAAATGT 
    TTAAATAAAT AAAAATAAGA CATGTGTTTT TGTAGGTTTG TTGAATATTT 
    TTTTGGGTAG TAATAATTTG AAAAAAAAAA GGGGAAATAA AAGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16708650 [Map]; Strand: w
      • AT4G35100.2 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: exon1 (5UTR)
      • AT4G35100.1 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13749 - 5-prime edge 
    CTTTCTCCCT GTTTAAATGG CAGAAGAGAT ACACTGGTCG TCGTCACACA 
    GCACCACAAA CTCCATAGCT AGCTAAAGAG TAAAAAGAAC AAAGATGTCG 
    AAAGAAGTGA GCGAAGAAGG CAAAACCCAC CATGGAAAAG ACTACGTGGA 
    TCCTCCACCA GCTCCTCTTC TCGACATGGG TGAGCTCAAA TCCTGGTCTT 
    TCTACAGAGC TCTCATCGCT GAGTTCATCG CTACACTCCT CTTCCTCTAC 
    GTCACCGTCG CTACTGTCAT CGGCCACAAG AAGCAAACCG GTCCTTGTGA 
    CGGCGTTGGT TTACTTGGTA TCGCTTGGGC TTTCGGTGGT ATGATCTTCG 
    TCCTCGTCTA CTGCACCGCC GGTATCTCTG GTAAGTTTGA ATCCCACCAA 
    AAACCCTAAC TTTTACTTGT TTGGTTCGTT GGTTTTATTG TTAATCTCGT 
    TCTTGTTCTC GTCTTCTCGT AGGTGGTCAC ATTAACCCAG CTGTGACTTT 
    CGGTCTGTTC TTGGCCCGTA AGGTCTCTTT GGTGCGAGCT CTTGGTTACA 
    TGATAGCTCA GTGTCTTGGA GCCATTTGTG GTGTGGGTTT CGTGAAAGCT 
    TTCATGAAAA CTCCTTACAA CACTCTTGGT GGAGGAGCTA ACACCGTAGC 
    TGACGGTTAC AGCAAAGGAA CTGCTCTCGG AGCTGAGATT ATTGGAACTT 
    TCGTTCTTGT TTACACCGTT TTCTCTGCAA CTGACCCTAA GAGAAGCGCT 
    CGTGACTCTC ACATCCCCGT AAGTCTCAAA AAGCTTGAAT CTTTAATT

AT4G35100.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 3
Curator Summary
a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP
Computational Description
plasma membrane intrinsic protein 3 (PIP3); FUNCTIONS IN: water channel activity; INVOLVED IN: response to salt stress, transport; LOCATED IN: anchored to plasma membrane, nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: guard cell, cultured cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;8 (TAIR:AT2G16850.1); Has 10883 Blast hits to 10871 proteins in 2222 species: Archae - 81; Bacteria - 5172; Metazoa - 1469; Fungi - 457; Plants - 2516; Viruses - 2; Other Eukaryotes - 1186 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35100.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 3
Curator Summary
a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP
Computational Description
plasma membrane intrinsic protein 3 (PIP3); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;8 (TAIR:AT2G16850.1).
Link
InterPro Scan - TAIR