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ET13752

CSHL Arabidopsis genetrap mutant lines

Original: ET13752

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13752

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4637848 [Map]; Strand: w
      • AT1G13550.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13752 - 3-prime edge 
    ATGAAACGGT AGAGGTATTG TACCGACCGT TACCGTCCGT TTTCATATGA 
    ATCATATGTA TAAGAAGCCA CAACCAGATC CTTATGACAT TCACCAACAA 
    GTAGTGATCA CAACAACCTC TTCGCCTTCC CGTTGTTACT ACTTTGCGAA 
    GCCTGTTGCT CCTAATGCTC TACTACCTGC ATTTCTTATG AGACAAGGCT 
    GGACAATAGA AAACTCGACT TCTACACTAC AAGACTTTGG TCTCATAGAT 
    GACGCAAAAG GTCTTAACTT AGAGCTTCGT TCTAAGCTTC CCGGTCTTGA 
    TATAAGCGTT GTTGTAGGGA AATGGTATGT TCCTTTCATA TTTGTGAAGG 
    AAGGAGACAT AATAGATCAA GTGAAAATAT CAATGTATTA GAACATGACG 
    CTTCATCAAA GATGGGAAGA AGTTTTCTTC TATGAGAATG TTCACAATGA 
    AGATTGTGTT GAGGTCGTTG TTGATGTTGA TCTTGAACTC CAAGTGATTA 
    ACGTTGAAGG ACAGAAGGTT AGTATAGAGA CAACGAATGT GGATGCTAAA 
    GGGATTGTTT GGTTCCAAGT TAAAGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16708688 [Map]; Strand: w
      • AT4G35100.2 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: exon1 (CDS)
      • AT4G35100.1 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13752 - 5-prime edge 
    GTCGTCACAC AGCACCACAA ACTCCATAGC TAGCTAAAGA GTAAAAAGAA 
    CAAAGATGTC GAAAGAAGTG AGCGAAGAAG GCAAAACCCA CCATGGAAAA 
    GACTACGTGG ATCCTCCACC AGCTCCTCTT CTCGACATGG GTGAGCTCAA 
    ATCCTGGTCT TTCTACAGAG CTCTCATCGC TGAGTTCATC GCTACACTCC 
    TCTTCCTCTA CGTCACCGTC GCTACTGTCA TCGGCCACAA GAAGCAAACC 
    GGTCCTTGTG ACGGCGTTGG TTTACTTGGT ATCGCTTGGG CTTTCGGGGG 
    GATGATCTTC GTCCTCTTCT ACTGCACCGC CGGTATCTCT GGGAAGTTTG 
    AATCCCACCA AAAACCCTAA CTTTTACTTG TTTG

AT1G13550.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1262)
Computational Description
Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13480.1); Has 101 Blast hits to 94 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35100.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 3
Curator Summary
a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP
Computational Description
plasma membrane intrinsic protein 3 (PIP3); FUNCTIONS IN: water channel activity; INVOLVED IN: response to salt stress, transport; LOCATED IN: anchored to plasma membrane, nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: guard cell, cultured cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;8 (TAIR:AT2G16850.1); Has 10883 Blast hits to 10871 proteins in 2222 species: Archae - 81; Bacteria - 5172; Metazoa - 1469; Fungi - 457; Plants - 2516; Viruses - 2; Other Eukaryotes - 1186 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35100.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 3
Curator Summary
a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP
Computational Description
plasma membrane intrinsic protein 3 (PIP3); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;8 (TAIR:AT2G16850.1).
Link
InterPro Scan - TAIR