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ET13770

CSHL Arabidopsis genetrap mutant lines

Original: ET13770

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13770

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17039841 [Map]; Strand: c
      • AT4G36010.2 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
        Distance: 0; Region: intron1 (CDS)
      • AT4G36010.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13770 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACCAACGG 
    GTGAAAATGT GAATGTCGTC TTGTCATATG ATTTCACAAA TTGACAAAAG 
    AACACGGACC ATTATGAAAA AGTATGTTCC ATGATTTTTA TTCGGTGATT 
    GACCTCAAAT TCAAAACGTT ACACAAACAA AACAAAAAGG TGAATAATTC 
    ATCTCCAACC AACATTATCA AACTTTTGAA TGTGATAAAA AAATCGAAAC 
    CGGACTTCTT CTAAAGGAAT CAGAACCAAA CTTTTTTCCT TTTTCAATAT 
    GATTTGATCA GATCATCGGA ACCAACCTTT TCTAATTAGC AAAAATATAC 
    CATTTTTTTG GAAAAAAATT CTAACTCGAT TTTTATACTT TTTGGTGAAT 
    AATGGTAATA GAATTTTTTT TACCTTGGGT TAGGAGAAGG ACAGAAAGTG 
    ATGACGTAAT CAGCTCCGCC ACAAGTGAAG GTACTAGTTC CGTCGTCGTA 
    AGCGTAACTA TAAGCTCTCG GGCACGCGTT TTTGAAAAAC TGTGAGTACT 
    CGCTTGGCTT ACACGTGTCC GGCGTTCCAA ACGCGCCGCT ACAGCAATAC 
    TCCGGCGTTC CAAACGCTTC ACACGCGCTT TTGCAAGCTA CT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17039783 [Map]; Strand: c
      • AT4G36010.2 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
        Distance: 0; Region: intron1 (CDS)
      • AT4G36010.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13770 - 5-prime edge 
    CCTACTTTCT CCCTGCCCGT TGGCATAATT ATATCAACCA AAATAAATGA 
    AAATAGAAAA AAATCTAATG TTCTCTGTTG TATGCATTTA GATTTTTATT 
    CATTCAAACG TCGGTGAACC GTGGTCCAAC ACGGCTCTTT TGTTCACATT 
    GCAAAATAGT TCAAATATAT TTTATAGAAA ACGTTACTTT AATAAATTGG 
    TGATACTAAA ATTTGTTTTC TTGTGTAATT TGTCTTTCAG TGTGAAGAGT 
    GCAACGAAGG GAGTCCAACC CGTAGCTGTT AGCTACTCTA AGGCATCTCC 
    AAACGCGTCG CCAACTCTTT CTGCCGTGTT TTCGATTGGC GTTTTGGCTG 
    TCGCGTCTTG GGTGATGCAA CGCGTTTTGT GATTCATGTA CGGCTGCGTT 
    TGAAGTTTTT AATAACATCA ATCTCAATCA TTCGACGAGA AAGAAAAGAT 
    CATTGAAGAG AAGATTTTAG TTAGTCGAGG AGTGATTTAT TCTAGGTGAT 
    AATTTGTAGA AGAACAACTT ATTTTAGATT GGATTAGTTC TAGTATTACT 
    ATTAGTTTCT ACGTAATTTT TTAGACAAAT GTTCAGTCTT TATGGTGTCT 
    CTGTAAGATA TATAACAGTT TTGCTTGCAC AACTAATTGA TT

AT4G36010.1

Model type
Protein coding
Short Description
Pathogenesis-related thaumatin superfamily protein
Computational Description
Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT2G17860.1); Has 1622 Blast hits to 1597 proteins in 186 species: Archae - 0; Bacteria - 48; Metazoa - 58; Fungi - 84; Plants - 1413; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G36010.2

Model type
Protein coding
Short Description
Pathogenesis-related thaumatin superfamily protein
Computational Description
Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT2G17860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR