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ET13776

CSHL Arabidopsis genetrap mutant lines

Original: ET13776

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13776

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1581065 [Map]; Strand: w
      • AT3G05470.1 - [+] show detail - Actin-binding FH2 (formin homology 2) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13776 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTGCTCAGAA 
    CAAGCTCTTT CGAGTAAGTT TTTAACTAGC CACAATCAAC AAAATGTTTT 
    TCATGAATGT GTGATTATGT GGTCTTGTGG TTATTCAGAT TAGACGAAGA 
    GATGATTGAG TCACTGTTTG GATATACGAT GCAAAGCTCA ACGAAGAATG 
    AGGAAGGGAA GAGCAAAACT CCATCACCAG GGAAACACCT TCTTGAACCT 
    AAAAGACTTC AGAATTTTAC CATTCTCTTG AAAGCTCTCA ACGCAACCGC 
    GGACCAAATC TGCTCTGCCT TGGGGAAAGG TAAACTAATA TCAACCAAAA 
    TCAATCCATT GAGGACTGAA TCTGATGTTA AAATGTTTAT CTGTAGGGGA 
    AGGCTTGTGT TTACAGCAAC TAGAAGCGTT GGTGAAGATG GTGCCGACTA 
    AAGAAGAAGA GTTGAAGCTG CGTAGCTACA AAGGAGCCGT GGATGAGCTT 
    GGCTCAGCTG AGAAGTTTCT CAGAGCTCTT GTTGGAGTTC CATTTGCGTT 
    TCAGAGAGCT GAAGCAATGC TTTATAGAGA ACGTTTGAAG ATG

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1581153 [Map]; Strand: w
      • AT3G05470.1 - [+] show detail - Actin-binding FH2 (formin homology 2) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13776 - 5-prime edge 
    CAAACCATAG TCCGGTCTGG TGTAGCCCTG ACTTTATCCC AGTGAAGTGG 
    CTTCAGTTTA GGCAATGGAG CTCCGTCTTT GCCTAATGGT CTACGCTCAC 
    AAAAATCAAG AGACAATGGC GGTGGAGGCG TTTTATTAAT TCCAGCTACT 
    TGAAGCTGTT GTGGCCGGGG CGCCGGTGGC GGTGGCACGC GGTTGACAAT 
    TTGGTACATT GATCCGAAAG CTTGTCTTCG AGGAAGAAGC ACAAAGTTTT 
    CCACATAATT GCCACAAAAG CGTCTGAAAA TTAACGCCTT CTGG

AT3G05470.1

Model type
Protein coding
Short Description
Actin-binding FH2 (formin homology 2) family protein
Computational Description
Actin-binding FH2 (formin homology 2) family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homolog 6 (TAIR:AT5G67470.1); Has 5495 Blast hits to 4819 proteins in 357 species: Archae - 2; Bacteria - 168; Metazoa - 2550; Fungi - 658; Plants - 1088; Viruses - 235; Other Eukaryotes - 794 (source: NCBI BLink).
Link
InterPro Scan - TAIR