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ET13787

CSHL Arabidopsis genetrap mutant lines

Original: ET13787

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13787

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9168851 [Map]; Strand: c
      • AT2G21420.1 - [+] show detail - IBR domain containing protein
        Distance: -862; Region: promoter
    Flanking Genome Sequence: ET13787 - 3-prime edge 
    ATATCTAAGA TGCTTCAATA AATGTTCAAC ATTTTAAGGT CAAAGAAGTA 
    ATAGTTGTGT AATGAATAAT ATAAATCTGA GCAAATATTG ATACAAATAT 
    ATTTTTAAGT GTTCCTATTT CTATTTTATT TTGTTGAATG TTTGGATATT 
    ATTTAGTTAA TAATATGGGC CATAATTCAT CTCACTCGA

AT2G21420.1

Model type
Protein coding
Short Description
IBR domain containing protein
Computational Description
IBR domain containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C6HC-type (InterPro:IPR002867); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G37560.1); Has 87308 Blast hits to 18333 proteins in 957 species: Archae - 370; Bacteria - 41195; Metazoa - 14245; Fungi - 8075; Plants - 4321; Viruses - 1278; Other Eukaryotes - 17824 (source: NCBI BLink).
Link
InterPro Scan - TAIR