1. Home
  2. Mutant Lines
  3. ET13790

ET13790

CSHL Arabidopsis genetrap mutant lines

Original: ET13790

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13790

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9168739 [Map]; Strand: c
      • AT2G21420.1 - [+] show detail - IBR domain containing protein
        Distance: -974; Region: promoter
    Flanking Genome Sequence: ET13790 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCTA GGGACAACAA 
    TCCTAAAAGT CTATCAGAAC CTTCTCAATC AATTCAACTA TATAAAAAAA 
    GTTAGAAATG ATATATCTAA GATGCTTCAA TAAATGTTCA ACATTTTAAG 
    GTCAAAGAAG TAATAGTTGT GTAATGAATA ATATAAATCT GAGCAAATAT 
    TGATACAAAT ATATTTTTAA GTGTTCCTAT TTCTATTTTA TTTTGTTGAA 
    TGTTTGGATA TTATTTAGTT AATAATATGG GCCAT

AT2G21420.1

Model type
Protein coding
Short Description
IBR domain containing protein
Computational Description
IBR domain containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C6HC-type (InterPro:IPR002867); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G37560.1); Has 87308 Blast hits to 18333 proteins in 957 species: Archae - 370; Bacteria - 41195; Metazoa - 14245; Fungi - 8075; Plants - 4321; Viruses - 1278; Other Eukaryotes - 17824 (source: NCBI BLink).
Link
InterPro Scan - TAIR