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ET13794

CSHL Arabidopsis genetrap mutant lines

Original: ET13794

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13794

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5001341 [Map]; Strand: w
      • AT3G14860.1 - [+] show detail - NHL domain-containing protein
        Distance: -295; Region: promoter
      • AT3G14860.2 - [+] show detail - NHL domain-containing protein
        Distance: -295; Region: promoter
    Flanking Genome Sequence: ET13794 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTATAGT ATAAAGTTGC 
    ATATAATTTA TTTACCTTAT TTTGAAACAG ACAAGAAAAA GGTATTGATG 
    CGATTGGACA TGTCGTAGAA GTGCTTCTGA TCTGATCGGC TTTTTTTTTT 
    GGTTCCTTAC CTTAAGTTTG GCCTTTAAAA ATCAAAAAAT TTTAGGGGCC 
    CAGGGGCCGG GGGTTAAAAG GATTTCCCCC CCCCAAAAGG GGGGTTTTAA 
    AAGGAAAAAA CCTTAAGGGG CCTTTTTAAG GGCCCCAAAA AAACCCGGGA 
    ACCCCCAAAG GGGACCTTTT TTTTCTTTAC CAAATTTTTT TTTTTATTTT 
    AAAAAAAAAA AAAAAAAAAA TTTTTTGCCC CCCCCAAATG GGTTTCTTTC 
    CACCCATGGG GTTTTGGGGG GTTTAAAAAA ATAAAACCCC CCCCCCAAGG 
    GTCCAATCCC CACAAAAAAT TGTCCTTTTG AAAAAACCAA AAAAAAAAAG 
    GGGCAAATTC CAAATTTTTT TAAACCCTAA AAGCTTAACT TGTTTTTTTT 
    TAAAAACTTT CTCCCCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5001407 [Map]; Strand: w
      • AT3G14860.1 - [+] show detail - NHL domain-containing protein
        Distance: -361; Region: promoter
      • AT3G14860.2 - [+] show detail - NHL domain-containing protein
        Distance: -361; Region: promoter
      • AT3G14870.2 - [+] show detail - Plant protein of unknown function (DUF641)
        Distance: -960; Region: promoter
    Flanking Genome Sequence: ET13794 - 5-prime edge 
    ACTTTCTCCC TGCTTTATAG TATGTGAATA GTCGTTAATA CATAATAAAA 
    AAATCAAGAA TAGTCGTGAA TAGAGAAAAT CCTTTTTATC AAATCCATAC 
    TCTCATAGGC TCATAGCTCT CAATTCTTGG TTTGAAATTG AAATCGAATT 
    GTCTCTCAAG CTTTTTACTT TCCGTTAAAC ACGGACAATT AACTCACTTT 
    GTACTAACTG ATAAAATTAC ATGCATATGC CACTCCACCA CTGCATCAGT 
    GCATTGTATT CATAACTCGT ACAAATATAA CTGGAATGAT GTATTCTCAC 
    GATTTCTATA TTTATAAAGT TTGCATTTAA AGCCCACCAA GACTAATTTG 
    GTTTACTTAT TGCTTATAAG AGGATTCAAA CTTTGGACTT AGCAATTTTC 
    AATCTTGATT TTGCTTTCAT CGATAGGACA ACTGTACTTA TTGAGTTGCT 
    TCACGTATTT AGTGAAAGCT AATACTGCTA TTCAGCTGTC TTTTATGCAA 
    CTTGACAAAT AATTTAAGAG TCTTATTTTA TTTTTGTTCA ACATTTAAGA 
    GTCTTATTTA AAAACAAAAG AACTTATAGA GAATGAACTT ACATAATTCT 
    CGTTTGATTA AATAAACATC AAGGCAGTTA AATACGGAAC TAAAGAAGGG 
    TTAACAAATA GAAAGCGTTT TCAGGAGAAT GTGGGAAATG GTTACACTTT 
    TTTTTTAATT TGCCAC

AT3G14860.1

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; CONTAINS InterPro DOMAIN/s: NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G70280.2); Has 2752 Blast hits to 1249 proteins in 210 species: Archae - 76; Bacteria - 1297; Metazoa - 50; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 1116 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14860.2

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; CONTAINS InterPro DOMAIN/s: NHL repeat (InterPro:IPR001258), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT1G70280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14870.2

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF641)
Computational Description
Plant protein of unknown function (DUF641); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT1G53380.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR