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ET13797

CSHL Arabidopsis genetrap mutant lines

Original: ET13797

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13797

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24432103 [Map]; Strand: c
      • AT1G65690.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13797 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGGTATG ATCCAACTTT 
    ACCAAAAACG ATTGATTTGA ATGAATTAAC TCTATTATAT CCGAACTATT 
    GAATATGAAC CGAACAAAAA CTATCTAAAC CAAATTTTGT TTGAAACTAA 
    AGATATACAG TATTTGACAA TCCTAATCCA AAATGAAAGT AAACCCAAAG 
    CCAACCAAAA AAATTTAGAC ATCCCTAATT TGAAAAGAGT TTTAAAGTCT 
    TCCTTGTGTA CGAACCAAAC CAAAGGAAAA GAACAGAAAT CAACCAAATA 
    AACCGGTTTT GTAGTGAGAT TTTGAAGCCT TCCTACGTTA AAAAACCAAA 
    AGAAAGCAAA CCGGAGTAAA CCAAAAGTGA CGTACCATTG CTTAGTTGAT 
    GTTCCATGTA CCACACAGTA ATCTTGCTCC CATCTTCATA ATAAATTCCA 
    ATCTTCTCGT TCGGATTCTT AGCGGTTATA GTCACGTTAA AAGCCGTAGT 
    CAAACTCGAG TCTTGGTTCA GTGCAAACCG GGTGAGCTGT AACCGGTCAA 
    TAGAGTAATC CGGTAGCTTC GGTTTAAAGA CAAGGTATAG TATACCAATG 
    GATGCGCCTA CTGCAACGAC AAGAAGCAAA AGAAAGCAGA ACGTGTAGCA 
    AAAGCATCTG CAACAACA

AT1G65690.1

Model type
Protein coding
Short Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Computational Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 25 (TAIR:AT5G36970.1); Has 985 Blast hits to 984 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 985; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR