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ET13801

CSHL Arabidopsis genetrap mutant lines

Original: ET13801

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13801

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17980856 [Map]; Strand: w
      • AT4G38401.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: -971; Region: promoter
      • AT4G38405.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: -299; Region: promoter
      • AT4G38410.1 - [+] show detail - Dehydrin family protein
        Distance: -84; Region: promoter
    Flanking Genome Sequence: ET13801 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATA 
    GTAATTAACA CTCGGTTCGC GTTTAGCCAA GGTGTTGCCG GCAAATTGTA 
    CTAACAAGTC AATATTTTAA GGACCGACTT TGATCGGAAC AAGGTTTGTT 
    TTTTTCGGAA AGTGTAATAA AAAACATAGT ACATGTCCGA ATACTCTGCG 
    TTTCGTCGAC CAATGGATTG TCGGTGTGGA CGGTCCACGT TATCCAATAA 
    AGAGAGCAAA AGCACTGTTT AAATTGTTTA GACATTATTA GAAAAATAAG 
    TTTGAAAATC TTACTGCTAA CTGAAGTGTC TTGATTGGGC CGAATCAGAA 
    GATGGGCTTA CATAAACATA AAAGGGCCAG TATTGGGTTA AACTTGATGG 
    TTTTGGTTAA TGCTGCTCAC GTCATTGGAC TTCTTTACAG CCCCACCACT 
    AAAAAAAGAA GAGGAACCAA AGGTTTACTC TTCCTGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17980909 [Map]; Strand: w
      • AT4G38405.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: -352; Region: promoter
      • AT4G38410.1 - [+] show detail - Dehydrin family protein
        Distance: -31; Region: promoter
    Flanking Genome Sequence: ET13801 - 5-prime edge 
    TCCTACTTTC TCCCTGATTA CTATAAATTA ACTGTAACTA AAATAAACAA 
    ACTAAAAGCT AGAGCTACTA TAAATACAGT GTCGCAGGGG TTTGTGTAAC 
    TCATCAGTCC TCACAGCTAG CAAAGGAAAG TCTCGTTGGT AAATTAAAAG 
    TGAGTCTTGA ATACCTTGTT TGCGTTTTTC CTAAAAGATG GCGGATCATC 
    CTCGTTCTAC TGAGCAGCAA GAAGCTGATG CTGCAGCTTC CAAAGGCTGT 
    GGGATGTTTG ACTTTCTCAA GAAGAAACCC GAAGATGTAC ATTCTTCCGA 
    GAATGCCCGT GTAACCAAGG AGCCCAAGGA AGAGGAGAAG CCTTCTCTCG 
    CTGAAAGACT CCACCTTTCT GACAGCTCTG TAAGCTTAAT TGTATACTCT 
    TGTTCTTATG CATGAGAAAT GTTAATAACA CTTGTTGATG GAGGATGTGA 
    TATATATGTA TATGCAGTCA AGTGATGAGG AAGCGGGTGA AAATGGGGAA 
    AAGAAGGAGA AGAAGAAGAA GAAGAAGAAG AATGAAGTTG CTGAAGATCA 
    ATGTGAAACA GAGGAGAAGA TTCCTGCGGG TATAGGCCAT GAGGATGGGA 
    AGGAGAAAGG GTTTATGGA

AT4G38401.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38405.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38410.1

Model type
Protein coding
Short Description
Dehydrin family protein
Computational Description
Dehydrin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); Has 3050 Blast hits to 2020 proteins in 252 species: Archae - 4; Bacteria - 32; Metazoa - 564; Fungi - 141; Plants - 1342; Viruses - 0; Other Eukaryotes - 967 (source: NCBI BLink).
Link
InterPro Scan - TAIR