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ET13810

CSHL Arabidopsis genetrap mutant lines

Original: ET13810

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13810

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11586625 [Map]; Strand: c
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET13810 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAACTAC ACAACTGTCG 
    GTGTTTTTCC TCCTCTCCCC ATCAAACCTT TCGCAAACGG ATACATATGA 
    AGCAAAACCC AACTGGCAAA GAACGTCCCT CCAAGAAGAT TGCTCCACTG 
    TGGATTCGCA CTGAAAACCG TCCTACAAAC CGCGAAAAGT ATCGCTACGA 
    TGTTCAAGAT TATGATTGTT AACGGTGGAA TCATCAGAGC AGTCCATTTA 
    AACAGATAAA GATCAGCGAA CTCGTCGTCT TCATCATCTC CTCCTGTTGA 
    AGATTTTGAA GTCAAGGTGA AGGAGATTTC GACTCCGGCT ATGACTTTGA 
    GTATACCTTG TAGTACAGCG ACTAAATGTG CGCTCGTGCC ACCGATTAAC 
    CAGAACTGCT CGTTTCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11586557 [Map]; Strand: c
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET13810 - 5-prime edge 
    CCTACTTTCT CCCTGTGTAT GTTTGGTCGG GACTTATCGC TATTTGCTTG 
    TCTCTTCTCT ACATTACCAT TAAGAATTCG GAAATTGATG GAGGATCGTT 
    TATGTTGGTT TAGAAGCATC CCATAGATAG GAGAATGTAA ATATATGTTG 
    TAGTGCTGGT GGGAACTGAA ACAGAGTGGC GATATAAGAA ACATAGCATA 
    CATTTTAGAT ATATCATTAC CGTTTAAGGT CCATTATTGT TTATTTTTAT 
    GTGGATTTTG GTTTTATCAA TCAAGATTTT GTTTTGGATG ATTTTATTTG 
    TTAAGATTGT AGTTCTTGTT TTGTTCGATT GTTAGTTTGT ATTCTATTCT 
    TTTCCGGTGT CGGCAAAATC TATAAGAAAG ACAAAGATTA ACACACAAAA 
    CAAAACTGAA CAGAAGAGGA AAAGAAAACA GAACCAAATC TTCTCCTCAA 
    GTTGTTAAGT TAAAGCAAGA GGGGAAGAAG AAGAAACTAT TCAAATCTCG 
    AAGATGACTT GAGAAGATCT CATGATACTC ATCGTACAAA GCTTTTCTTG 
    GCTGCCCTAA AACTTTTCTC TTCAAAAGCA TAATTTGAAA TCTCACCA

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR