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ET13813

CSHL Arabidopsis genetrap mutant lines

Original: ET13813

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13813

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 19157 [Map]; Strand: c
      • AT4G00050.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: ET13813 - 5-prime edge 
    CCTACTTTCT CCCTATGTGT AATGTAGATT GTGTTGATTT TTGAGTCGAC 
    AGCCACAAGG CATATAATAA TTAAAGGTGT ATATGAATGG ACCAACCGGA 
    CCAAGTAATA AAGTGATGTA AAATAAGTTT TTAGGGGACA AGCAAATAAG 
    AGATTGATGA ACATAAGTGT GTGGAGTAGA ATCATCGTAT GAGGTCCATT 
    TCTTTAGATG CATTCACTTC ACTTTGGTCC ACCACCCTTT TTCATATTAT 
    CCCCTCTATT TTCATGTATA CCTAGCTAGC ATCTATTTTT TTACTATACG 
    TACGCATATG ACTTTTATTT AGCCACGTAC ACTAGTTTAT GTAAAACGAC 
    TTGCGTACCT TGCTGGAATT GGGAACCAGT TTTTGCAAAG TCTTCATCCT 
    TTGATTGATT TTATCTCTCC TCTTCTGTAA TAAAATCAAC CAAGGATAAA 
    ACCCAGGGGG TCATGCATGT GTAACAGTAG ACGAATAACA TGAAACTTTT 
    TTTGAAAAAT AAAATAATGG TTGAGTGAAT CATTACACGT TCGGATTGGT 
    TATGAATAGC AGCAGCTCTG CTTCTCTTGG TTGAAACTGA TGATTTTCCT 
    CCGGC

AT4G00050.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR