1. Home
  2. Mutant Lines
  3. ET13827

ET13827

CSHL Arabidopsis genetrap mutant lines

Original: ET13827

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET13827

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1256773 [Map]; Strand: c
      • AT4G02810.1 - [+] show detail - Protein of unknown function (DUF3049)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13827 - 3-prime edge
    AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT TACTGCCTTA 
    ATTGGAAGCA GCAGCAATTT TGGGTGACCA CTTAATGGGA ATTACTCAAC
    TCAGCAAATA ATTATTTTTT ACGACCGCAA TAATTAGTAT TATGGCCTAT
    TTATTTTGAT TGTTTAAGTG TGATTTGTAA TATGGAAGAC GATGAGTGTT
    TTCTTAGTCC CATTGTATGA CTATACGGCT TCTAATTCTA CATATATAAA
    TGCTAAAATG TGAGTTAATT GTTACTTAAA CTGTTAAACA ACATAGAGTA
    CTCATCTTCA TTATCTGTTT TTACCTTTTT AGTATGTTAT AGCTAACCTT
    TGATTATTAA TATGTCTAGT ACAAACTTTG CGAAGATGCG GATTCATACA
    CACCAATACA TACATTTAAT AGTGAATCTG TTATATGCCA ATATACATGA
    CGAGTTTGTT GAAATTTATC ATGATTTTAT GAAATTAAAA AAACAGGGAA
    TATAGATGTT ATAAACCGAC TTAGTTTTAG TTTTGTTGTC ATAGACTAAC
    GAGAGTGACA CTATAGTTTA AAAAAGGGTA ATAAAGTACC AGTAATAGTG
    AGACTGACGA ANACTACATG ATCACTTTCA AAAAACTTCA TTGAAATTTT
    GGTAACATCA TCTACACTAG TTTGC
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1256962 [Map]; Strand: c
      • AT4G02810.1 - [+] show detail - Protein of unknown function (DUF3049)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13827 - 5-prime edge
    CCAGCATAGT TTTAGGCTCA CACCCATTTT CATTGCATCT CCTTTTTGGC 
    CTGTTGCTAA CCTTTTTATT TCCACTTTTA CCCTCAAAGT TCTACATTAT
    TCCCCACAAT GCCCTCCTCG ACCTCTTCTT CTTCTTCTTC TTCTTCCGCT
    GCATCGAATT GATCATCTTC ATCTCTCTCG ACCAAC

AT4G02810.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3049)
Computational Description
Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT1G03170.1); Has 61763 Blast hits to 21586 proteins in 896 species: Archae - 112; Bacteria - 2155; Metazoa - 26171; Fungi - 6892; Plants - 3461; Viruses - 1647; Other Eukaryotes - 21325 (source: NCBI BLink).
Link
InterPro Scan - TAIR