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ET13837

CSHL Arabidopsis genetrap mutant lines

Original: ET13837

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13837

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1539133 [Map]; Strand: c
      • AT1G05280.1 - [+] show detail - Protein of unknown function (DUF604)
        Distance: -1608; Region: intergenic
      • AT1G05290.1 - [+] show detail - CCT motif family protein
        Distance: 19; Region: intergenic
    Flanking Genome Sequence: ET13837 - 5-prime edge 
    CTTTCTCCCT GCCCCGAGCT AATGATATTA ACAAAGGGAA AATACAAACA 
    TGAGCTAATG ATAACCAAGC TCAATTGTGA TATCCAAATA AGGAAAATAA 
    AAAGATGGTT GCAATAATAT ATATGATGAT CATCATCATT ATGGTTCCAT 
    GATTTTTTGG ACTTTGTTTT GCCAAGGGTG TTTTGTAGTT CAGTGGTTTT 
    GTCTGATTGG TCGAGATATC GATATCCACT GGATGCACAC GCTTAAAGGA 
    CTGCAAAGGT TCACAGAGAG GTCAAAACGA TCTCTAGTTC TCTACTATAG 
    TGTTTTGATT CCACTCTATA GATTTTTTTC CAAAATTATT TTTTTCTTTT 
    ATTATTTACA TTTATTTATT TCTTAAAGGA GCTTTATTGC AGTTACTGTC 
    AAATTATTTT ACCAAAAACA ATAACTAAAT TTTTCGGTAA GACTCTAACC 
    GAAAGTTAAT TCGGTTCGTT TGATTTGGTT TTTGTTCGGT TAAATTTGGT 
    TTGGTTTGGT TTTTGTTTGA TCGATTAAGT TTTGAATGAA TTTCTGTGGG 
    AGTTGCTTCT CAAAGACTTA AACCTGCAAC TTGGCAGTTT T

AT1G05280.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF604)
Computational Description
Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G15240.1); Has 523 Blast hits to 513 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 61; Fungi - 172; Plants - 273; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05290.1

Model type
Protein coding
Short Description
CCT motif family protein
Computational Description
CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT3G21880.1); Has 1471 Blast hits to 1456 proteins in 101 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1426; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
Link
InterPro Scan - TAIR