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ET13839

CSHL Arabidopsis genetrap mutant lines

Original: ET13839

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13839

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24041015 [Map]; Strand: c
      • AT1G64700.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-ter...
        Distance: -420; Region: promoter
    Flanking Genome Sequence: ET13839 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCCAGT GGAACATTTT 
    GAGCTGTGAT ATCCCAGTTG TGATATCCCA AAAAGAAAAG AATTTGGCTA 
    TAAAGAATAC ATCGAATCAT ATTATGTTCG ACTAAGGGAG AAGAGAGAAA 
    GAGAAAAAGA AGAACAGAAT AAGTGTGAGT AAACGGCTTA GTAAATGGGT 
    CCATTCTACT TCAATTGAAT CCTTTATTGG GGCCAAAATC CTATTGAATC 
    CTA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19427548 [Map]; Strand: c
      • AT2G47320.1 - [+] show detail - Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: ET13839 - 5-prime edge 
    CATTTAGCTT CTGCAGAATA TCAAATCTAT ATGGAATTCG AGATCGAGAG 
    ATATATCTTT CACTGATCTA GACATGGGAC GAACAAAGTA AGATTTGACG 
    AGATTCGAAA AGAAAAACAC AACATAGATC AATCCAGAGT TGTTCAAGCA 
    CAAAGACTCA AAATCGAATT CTGGAAACTA AAATCAAGCA AAGACTAACC 
    TCTTTGGTCT TCTTCTTCTT CTTCCTTGCA AGGGAGTGAT TTGATTTCTT 
    GGTTCTGCGA ATCTATTTCG TCTTTAAATG GAAGAAGATG ACTGACGATG 
    TAACTCTCTC ACTCACAGAG AGGCACTCGA GTTTTTTTTT TTAAGG

AT1G64700.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47320.1

Model type
Protein coding
Short Description
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Computational Description
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G66654.2); Has 14608 Blast hits to 14586 proteins in 2637 species: Archae - 108; Bacteria - 6602; Metazoa - 2521; Fungi - 1253; Plants - 1050; Viruses - 0; Other Eukaryotes - 3074 (source: NCBI BLink).
Link
InterPro Scan - TAIR