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ET13842

CSHL Arabidopsis genetrap mutant lines

Original: ET13842

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13842

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 5412970 [Map]; Strand: w
      • AT4G08510.1 - [+] show detail - unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein m...
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: ET13842 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC TTGAACTTCT 
    TGCACTGTTT TTATAAAAGA TGTAAAGTAA AACGAGTTAA CAATGATGAG 
    AGAAATTAAA AGAAACCAAG GAAGAGTGTT GTTGTGTCCT TTACCCATTC 
    TCTCATCTCC TCCATTGTGT GGGTGTATTC GTCGCTATCA TTCTCATCCC 
    AACCAAGGGA TTTAAGGAAT GCAGCCTCTT TTGGATCTGG ACGGACTGCC 
    GATTCAAATC TACTAATCCT TTCTGCAACG TTAGAAACTT TCTCGACACT 
    TTCCATGATT T

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 5413067 [Map]; Strand: w
      • AT4G08510.1 - [+] show detail - unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein m...
        Distance: 0; Region: exon5 (3UTR)
    Flanking Genome Sequence: ET13842 - 5-prime edge 
    CAGAAGCTGC CTATCATATA AGAAGCAACC GAGGACATAG CTCCCGACTC 
    GTGATCAGAT TTTGTTCGGG GTTTTCAGAT GGAAGATAGT TTTTCATTCT 
    CTTTTCTTTT CTTTATTCTC TTTGGTTTTT TTTTTTTTCC TTGGGGAACC 
    CCCGGCCGGG GAAAAAGGGG GAAAGGTTTT TATTGGCAAA AAAAAATTGG 
    TCCGCTTTTT TTTCAAAGGG GGAAAAAAAA GAAAAAGGGG GGAAAATTTT 
    GGACACTTTT GGGCCAAAAA AAAAGGGGTT TTGGCAAGGG GCCCCTTTTT 
    TAGGGTTTCC AAGGGTGGAA GAACCTTCCG GGGGGGGGAA AAAAAAAATT 
    GCCAAAGGGG GTTAAAAAAA AAAATTAAAA AATTCCTTTT CCTACCTTTT 
    TAAAAAAATC CCCCTCCCCC GGCAAAAAAT TTTAAAAAAA TTAACCCTTT 
    TTAAAGGTAA AAATTTCCCC CCCCAAAATT TTGAACCCAA GGGGTTTAAA 
    AGGGGGGATT CAAAAACCCC C

AT4G08510.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36990.1); Has 888 Blast hits to 321 proteins in 121 species: Archae - 0; Bacteria - 120; Metazoa - 86; Fungi - 24; Plants - 79; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink).
Link
InterPro Scan - TAIR