1. Home
  2. Mutant Lines
  3. ET13855

ET13855

CSHL Arabidopsis genetrap mutant lines

Original: ET13855

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13855

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22333738 [Map]; Strand: w
      • AT1G60625.1 - [+] show detail - RALF-like 6
        Distance: -178; Region: promoter
    Flanking Genome Sequence: ET13855 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAGATAGAG 
    TTTCGTGGCT ATTTATATGT CATTTACAGT TTTTTCGGTT AATATGTTCG 
    GTTGGTTTCT AGCATGGCAG CAAATTTATC GGCCACAACA AGACTTTCGT 
    GAATATCTGT GTTGTCGTTA GTGTTTGTTT GTTTCGTTGT TGTAAAAATT 
    GATCTGTTCT GTTGTTTCTT CACTCTGTTC AGTGCTTGAT GAATGTGTAC 
    GTACGTATAT TCTAAATTTT TTTTTTTTTT TTCCAAAAAA TTTTTCAAAT 
    TTGACCCCGC GCCAAACCCC CGGTTTTTAA AATTTCCAGG GTTTTTTTAT 
    AAACTTCCGA AAAAACCCCC AAATTGAAAT AAACCGGAAC CCACCCGGGG 
    AAAAAAAACC AAATAAATTT TTTTTTCGGG AAATTAAAAA AATACCCTTT 
    CCACTTTTAT TCCCAAAATC CCCCCCGCCT CCTTAAAAAA AACCCCCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22333838 [Map]; Strand: w
      • AT1G60625.1 - [+] show detail - RALF-like 6
        Distance: -78; Region: promoter
    Flanking Genome Sequence: ET13855 - 5-prime edge 
    GGCCGTCTTT TTTTTAGAAT CATCCTTCTC ATTATAAATC AAAGAAACAC 
    AAATTAATAA TTAATCACGT ATTCAAACTA CAAAATATAA TAACATAGAA 
    AAATATCAAG AAGTTTCAAT TACATTGTTT TTGTTTTCTC AAAAAACAAT 
    GGCTGCACAC AAAAATAGTC ATATCCGCAT TTTCTTTGTT TCAATAATGA 
    TTATATTATC ATTGTTCAGC GGATTTGGAG AAGGACAAAC ATATATAAAC 
    TATAATGGTA TGAAAGGAGA CATAATTCCA GGTTGCAGCA GTAAGAATCC 
    CAAAGAATGT GTCAAAATTC CAGCATACTC TTACAATCGT GGTTGTGAAA 
    TTTCTACACG TTGTCAACGT CAACAGCATT CGAGTTCGAG TTAATTCATG 
    TATGATGTCA TATGTTTAAA TCATTTCTAA TATGAAAAAC TATATTATTG 
    ATGTGATATT ATTAACTCAA ATTTTAATTA T

AT1G60625.1

Model type
Protein coding
Short Description
RALF-like 6
Curator Summary
Rapid alkalinization factor (RALF) family protein. Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
Computational Description
RALF-like 6 (RALFL6); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: RALF-like 7 (TAIR:AT1G60815.1); Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR