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ET13876

CSHL Arabidopsis genetrap mutant lines

Original: ET13876

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13876

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 8660335 [Map]; Strand: c
      • AT3G23960.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 1391; Region: intergenic
      • AT3G23970.1 - [+] show detail - F-box family protein
        Distance: 112; Region: intergenic
    Flanking Genome Sequence: ET13876 - 3-prime edge
    CGGTAGAGGA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGGCTCG 
    GGCATGACAA TTGTATTACT AATACAAGAT TATGATCATT AATGGTAATA
    TAACAACAGT AAAATCAGTC ACATTTGAAA TTTGATTCAA GTACTCAAAA
    GAGAGAATAA TAGACTAAGA AGGCTGCGGA CGAGGGAGAC GGTGCAGCCA
    ACGAGGAAGA ACATACTGTG AAGCGAGGAG ATAGTTAGGA CCACCATAGT
    TATGGATAGT CTCCATATAC TCGCTGCACC TGTTAAAGCT CAAGGTGCAA
    CCATCCATAC ACTTGGTCTC GTCTTCGGAT TCCTTGTGAA GACTAAACAC
    ATTAGTCCTC AAGTTAAACA AAACCATACC TTTCTTGTTT CTGCTCCACA
    AGTAGATGAT CTCAGACTTC AAAGGATGCA TCACCACCGG GAAGTAATCG
    ATACCTAGCT CGATCACAGA CGCCAAGCTG ACTTCCCAAA AGAGCTGCCA
    CGCCTCAGGA CCACCAGTGT ACTTGACCAG CCTCCAAACA CGTAATCTTC
    GGTTTCCGTT CTCACCAAAC TCGTTGAAGT AGACAATAGA CCCATCCGAG
    GTCGACAATG TTCTCCTAAA ACGCCGTAAC TGATCATCAT CTTTT

AT3G23960.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G31470.1); Has 1347 Blast hits to 1277 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1347; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G23970.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G23950.1); Has 428 Blast hits to 427 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 427; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR