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ET13906

CSHL Arabidopsis genetrap mutant lines

Original: ET13906

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13906

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17857667 [Map]; Strand: w
      • AT4G38000.1 - [+] show detail - DNA binding with one finger 4.7
        Distance: -684; Region: promoter
    Flanking Genome Sequence: ET13906 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTATTGA 
    TAACTCACCT AATGATAAAC TGATTTTTTT CACACTGTAA AATGATTTTT 
    ATTCTTTCAT CATCTTTACA TTTTTGGTAT TTAACAGTAC TGTTCTTTAT 
    CCAAACCTTA GATACTAATA TATAACTCTT GGCTTACCCC CAAAATCTTA 
    TCATATATAT CATACTATTC ATTTATTGGA TTAAGCATAC GAAATTATAT 
    AGTTATACAA CAACACAAAA CTTAATTAGT ACGACAAACC AAACAAGAAA 
    ATAACATTTG AGGAAGTTTA ATGCTTAAAA CTTATAAATT AGGATTAGGC 
    TTCAATGTGT TGGCAACATC AATCACAAAG CGGTACCTAA CGTCGGCTTT 
    CTCTAGCCGT TCCATGGCGG TGTTGACATA ATCGGCAGAG ATAAGCTCAA 
    TATCCGCGGT GATGTTGTGT TTCCCGGCCA TATCTATCAT TTCCTGGGTC 
    TCTTTTATCC CTCCTATCAT ACTTCCCATT ACCATCTTC

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET13906 - 5-prime edge 
    GTCGGTAACG GTCGGTAAAA TACCTCTACC GTTTTCATTT TCATATTTAA 
    CTTGCGGGAC GGAAACGAAA ACGGGAAATA CCGGTAACGA AAACGAACGG 
    GATAAATACG GTAACCG

AT4G38000.1

Model type
Protein coding
Short Description
DNA binding with one finger 4.7
Computational Description
DNA binding with one finger 4.7 (DOF4.7); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 1 (TAIR:AT1G51700.1); Has 1084 Blast hits to 1079 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1079; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR