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ET13911

CSHL Arabidopsis genetrap mutant lines

Original: ET13911

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13911

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 6546884 [Map]; Strand: c
      • AT5G19410.1 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13911 - 5-prime edge
    CTTTCTCCCT GCCTATCCTA CACCATCAAT CACACCCCAA TACTCAATTC 
    CGTTTCATTA GCTGCTGAAT CCTCTAAAAT CCTAGCCGTG GTTGGACCGA
    GTGGAACAGG AAAATCCACT CTTTTAAAGA TCATTTCAGG AAGAGTGAAC
    CACAAGGCAC TAGATCCGTC TTCCGCGGTT TTGATGAACA ATCGTAAAAT
    CACTGACTAT AACCAACTAC GAAGGCTATG CGGGTTTGTC CCGCAGGACG
    ATGACCTACT GCCTCTACTT ACCGTGAAAG AGACGTTAAT GTATAGCGCC
    AAATTCAGTT TGAGAGATTC AACGGCTAAG GAAAGAGAAG AGAGAGTGGA
    GAGCTTGTTG AGTGATCTCG GTCTTGTTCT CGTCCAAGAC AGCTTCGTGG
    GAGAAGGAGA CGAAGAGGAT CGTGGCGTTT CGGGTGGAGA GAGGAAGAGA
    GTCTCTATAG CCGTTGAGAT GATTCGTGAT CCACCAATTC TGCTTCTTGA
    CGAACCAACC TCTGGTTTGG ATAGTCGAAA CTCGCTTCAG GTTGTTGAGC
    TTTTGGCTAC TATGGCGAAA TCCAAACAGA GAACCGTCCT CTTCTCCATC
    CACCAACCAA GTTATAGGAT CCTCGATTAC ATCTC

AT5G19410.1

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT5G52860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR