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ET13919

CSHL Arabidopsis genetrap mutant lines

Original: ET13919

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13919

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11114250 [Map]; Strand: c
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET13919 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAAATGGAC 
    TGCTTCTTGA ACGAACACTA TATTATCCGT ACTTACTCTC CCGGGGATAA 
    AACTAGCTTG AGCCGGACCA ATCAGATTTG TCATTAAAGG TTTCAGACGC 
    TCTACCATCG TCTTAGTGAT GATCTTGAAA AGCACATTGC ATAGGCTGAG 
    GCTCCTCTTT TTAACAAGCC CCAGCTCACT TCGTTAGGGT CTGTTTTCTC 
    GGAGATACTG CCGTTTATCT GCAGAAGACT GACAAAATAC AGATCGATCT 
    ATATCCGATC TGTTGACCTC GGAATCAAAG CATCAACTGA GCCCCGAGGC 
    TTATCTTTCA ATAGAGACCG ACCTCATCCA ATTCCGAGCT GTTTACTAAG 
    CGTTATCACT GTTTCAATGA AACATATGAC ACCTGTCAAA TCGCAGATTC 
    GAACTGTGGG AGCAACTGGA TTAGAAAGCA AACTCCCAAC GATTCAGAAA 
    ACATCAAGAG CCCATCTTAA TATCATCATG AAGCTCTGAG GCTTATCTTT 
    CCAACAAGAT CGATTTTGCT CCATTTGATG CTGTCTTCCG AGAGTTATAG 
    GTTTTTCTCT CAAGCATGCG TTGTTTATCG AGACACAGAT CCGTCTACAC 
    CCGATCTGTC TGCTTTCAGA TCGATTTCCC GGCGATCTAA AAGAACCAGG 
    AGCCGATCTG CCATCATTTT TGAGCTACAG GCTTATCTTT CTAACGGATT 
    CATCCTTGCC TCAAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11114136 [Map]; Strand: c
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET13919 - 5-prime edge 
    CATTCCATGA GAAGAAAAAA GGGGTAAAGG GCTGGATGCT TTTGAAGTTG 
    GATTTGGAGA AGGCTTATGA TAGGATCCGA TGGGATTATC TGGAGGATAC 
    ACTTATTTCT GCGGGGTTCC CCGAAGTTTG GGTAAGATGG ATAATGTGCT 
    GTGTGTCGGG CCCGGAGATG AGTTTGTTGT GGAATGGAGA GAGAACAGAC 
    TCCTTCAAGC CGTTACGGGG CCTCCGCCAG GGGGATCCCT TATCTCCGTA 
    TTTGTTTGAG CTATGCATGG AGAGGCTTTG TCACTTGCTT GATCCATCGG 
    GTGATAACA

AT4G20725.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.2e-31 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR