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ET13920

CSHL Arabidopsis genetrap mutant lines

Original: ET13920

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13920

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 83148 [Map]; Strand: w
      • AT4G00200.1 - [+] show detail - AT hook motif DNA-binding family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: ET13920 - 5-prime edge 
    CACTCATGCC ACCAGACCGA CCTTTTGAAC CTTGATTCTC TGTTTCCA

AT4G00200.1

Model type
Protein coding
Short Description
AT hook motif DNA-binding family protein
Computational Description
AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 772 Blast hits to 768 proteins in 34 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 0; Plants - 749; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR