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ET13922

CSHL Arabidopsis genetrap mutant lines

Original: ET13922

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13922

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2723020 [Map]; Strand: c
      • AT4G05330.1 - [+] show detail - ARF-GAP domain 13
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: ET13922 - 5-prime edge 
    TCCTACTTTC TCCCTGTCCG CAACATTGTA AGAACACCAA ATCTCCCTCT 
    CATTTCCAAT TTTTTGTATA TCTTCTTGTT TCATATTTAG ATCATCCAAT 
    CTCTAAGAAT GTTAAAGGTC AAATTTTTAA ATTTTTTTGT CGGTTTTTTT 
    TTCCTCTCCG GGGTCGGAAT CCGACAACGT AAGGATGATT CACATAGGTT 
    TTTAATTTTT GATATGAAAA GAGATTCTTC TCGGGATTGG CCCATTTGTT 
    TTGTTTTGAA ATTCACAACA ATGTTCACGT TTTGATCGCA AATTTAATTT 
    GATTTCCATG ATAAAAATTG GAACTTTCTT ATGTTGTGAT CATTTACAAC 
    AATTTGTGCG TGATGGGTTG TTCTCAATGT AGGATTTTGT TTGATGATCG 
    TTGGGTTTTG AAAGAAGAGC AATGAGCAAT TATGCAGCCG GACTCGGTAA 
    GCCTGGCTCA GGTAATGACA AATTCTTTCT TTTGTGTGTG TGTGTGGCCA 
    ATTCTATAGA TTTAGCGAAA TTTCTTGACT TTTTCATG

AT4G05330.1

Model type
Protein coding
Short Description
ARF-GAP domain 13
Curator Summary
A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.
Computational Description
ARF-GAP domain 13 (AGD13); FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent ARF-type GTPase activating protein family (TAIR:AT4G21160.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR