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ET13926

CSHL Arabidopsis genetrap mutant lines

Original: ET13926

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13926

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 40123 [Map]; Strand: c
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13926 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAGGGAAGT 
    CATCAAATTG AAAAGATTTT TGTTTCTCTA TTTTTGGGCC TTCTTTATTT 
    CTTTTTCTCT CGAAAATGCA CACACACAGA GAAGAAGAAG ATGGTCAAAG 
    AGCAAGAAGA GATTATGAGG ATTTAAGGGA TAGTCAAAGC TTAATTAATC 
    ACTCTAGTCT CTATCTCTTA CATTTAATTT TCTACAGATT TAGTTTCACT 
    CTTGATTAAT TTAGTTATTA TAGGTAGATT AACTTTACTT TTATTATTAA 
    TGAAGCTTTC ATCATCCTTA TGGATCTTAC TTTAGGGTTC TTATGGCAAC 
    AAATGTACTT TCATCGAATT ATCATTCAAA TAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 40060 [Map]; Strand: c
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13926 - 5-prime edge 
    CTTTATCCCT GATCTTCCCT TATTATTCGG AGAGCCTATA AACGCGTCTC 
    ACCAAACAAA CCAGAACCAA AACCAATCCA AGAAAAAAAA GAAACCTCCG 
    AGAAGAAGAA GAAGAAGATT CTCTCTGTAG AGGTAAATAT GGAAGCAAAT 
    GTCGCATCTT GATGATATTC CTTCGACGCC TGGCAAGTTC AAGCCCTACT 
    TCCACCGTAC GCGGTGGCAA TCCTCCGTCG CCAAGATCGC CTTTT

AT4G00110.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 3
Curator Summary
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link
InterPro Scan - TAIR