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Mutant Lines
ET13932

ET13932

CSHL Arabidopsis genetrap mutant lines

Original: ET13932

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13932

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 351524 [Map]; Strand: c
- AT4G00820.1 - [+] show detail - IQ-domain 17
  Distance: 0; Region: exon5 (3UTR)
- AT4G00830.3 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -492; Region: promoter
- AT4G00830.4 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -492; Region: promoter
- AT4G00830.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -499; Region: promoter
- AT4G00830.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -522; Region: promoter

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACTCTATA 
TAAATATGTA TGCTCATATT TTTATCTATA AATGTTGCAA TTAGGATGTG 
AACAATAGTT TATCAATCTG TCATGGTATC TTTGTTAATT ATATGGAATC 
TTTTTAGTAT AAAATAACGA AAATTTTCAC TGGCCTTATT TGTTTTTACA 
TGCAAAGTGA AGTTGTTAAG AAAACCATAA AAAAAAGCTG CAACTTTGCA 
ACTTGAGATC CACGAGCAAG GAACATTACC CATGTGACAT GATTCCTACA 
TGATCAGTCT TGTCTTCTAC GTTATACACT ACTACTCTAT ATCCACCTAA 
ATATAAATTA AATGCTTCTG AAATGGAATA ATCTTAAACA GCACGTAGTT 
TTCTATTCAC CNGAACAAAA CGGCAGGGCT GGCAAAATCA CGAATTTTTT 
AAACAGGTAT AATAAAGAAC TAGAAAACAC TAGGCCCAAT AAAAACAGTG 
GGCTTAAAAA GCGTTTTGAT TTAGGGTTAA TGTGTGCGTA ACATGTGATC 
ATAGCCCACG

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 351467 [Map]; Strand: c
  - AT4G00820.1 - [+] show detail - IQ-domain 17
    Distance: 0; Region: exon5 (3UTR)
  - AT4G00830.3 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
    Distance: -549; Region: promoter
  - AT4G00830.4 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
    Distance: -549; Region: promoter
  - AT4G00830.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
    Distance: -556; Region: promoter
  - AT4G00830.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
    Distance: -579; Region: promoter
Flanking Genome Sequence: ET13932 - 5-prime edge
```
TCCTACTTTC TCCCTGATAT AGAGATTAGT TAGTAAACAC TTCCAATTAT 
AAGCTACAAA TTCACACACA CAAACATAAA CACAAACAAA ATTACACACC 
AATCTCAAAG ATCATCAATA AAAACTGAAA AAGTTATGGT TCTTTTTGTC 
AAATTGTTTT TATTTATATA TAACAAAAAA AAAGGGGGGA AAAAAATCCT 
GGCCGGGTGA TTTGGTTGGA TTAAGGAAAC CTCTTAACCC TCCCCTAAAA 
ACCCTAGGAA AAACCGGGGA AATCCCCCCC CCCCCCCCCA AAAACCCCGT 
ACCACCAGAA AAAGAATTTG GTTGGTGTTC CCAAGCCCCC CATTGGGAAC 
CCCCCAAACC CTTGAAACTT GGACCCCTTA AACCCTGACC ATCCATTTGG 
TGCGGCAGCG GGGGAACCCG AAAACAAAGC CCTTTTCCAA CTGAACTGAA 
ACCTTCCTTC CCGGGGGGTA AAGGCCCTTT CCTTGGGGCC CCCCGAAACC 
CGAATCCAAC CTTAACAAAA TCCCAAAACC CCCTGGAATT TGGCAAAG
```

AT4G00820.1

Model type: Protein coding
Short Description: IQ-domain 17
Computational Description: IQ-domain 17 (iqd17); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 18 (TAIR:AT1G01110.2); Has 1332 Blast hits to 1131 proteins in 120 species: Archae - 0; Bacteria - 14; Metazoa - 172; Fungi - 58; Plants - 857; Viruses - 43; Other Eukaryotes - 188 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00830.1

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2); Has 49171 Blast hits to 28860 proteins in 1092 species: Archae - 87; Bacteria - 2901; Metazoa - 24152; Fungi - 5892; Plants - 6872; Viruses - 415; Other Eukaryotes - 8852 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00830.2

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00830.3

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2).
Link: InterPro Scan - TAIR

AT4G00830.4

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2).
Link: InterPro Scan - TAIR