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ET13940

CSHL Arabidopsis genetrap mutant lines

Original: ET13940

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13940

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2726045 [Map]; Strand: c
      • AT4G05340.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13940 - 3-prime edge 
    GTAGAGGTTT TTACCGACCG TTACCGACCG TTTTCATCCC TATGCTTTGT 
    ACCTTGATAT TCGAAGAACA TGACATGTTT GAGCTTATTG AGAAGATGTT 
    ACTTGAGGTG AAAGCAACTC TAGCTGAGAT CACAGAGCAG CTTATGGTAA 
    GCAAGAATCC GGATGTATTA CGCTTAAGGG TGTTGTTGAG TTTCTTGACA 
    CCAAAAGGTT GACTAAGGAG ATATACTGTT GATTCTAAAA TTTAAAGAAG 
    CAGAAGCATG AAGCTTCAAG GATCCGTGGA AGTGGTTATG CATTTCTTAG 
    TTTGATTTAA GAACTTTGCC TCAGACACTA AATTTGGAAG ATGACACACT 
    CGACATGTAT CAACTCTTTT AACATCTTGT TGGAGTTCAA TTTGTTGTTA 
    TAAAGCTTGA AAGATCTTAA CGTTCCTTGT TCTTGCCATT TTGGGCTCAA 
    ATTTGCAGAA AGTTTCTCAT CTTCAACTAT TTTAACATAT ACGTTTCAAG 
    ATCACTAAGA AATGCTGAAG TAGAGATATC CTTTAAAAAA TTTGAGGAAT 
    ATATATGATG GTAACAAATA TGTTG

AT4G05340.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G05380.1); Has 1268 Blast hits to 1261 proteins in 221 species: Archae - 0; Bacteria - 63; Metazoa - 158; Fungi - 372; Plants - 536; Viruses - 9; Other Eukaryotes - 130 (source: NCBI BLink).
Link
InterPro Scan - TAIR